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<a href="tgca__vkcentroid_8hpp.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno">    1</span>&#160;</div><div class="line"><a name="l00024"></a><span class="lineno">   24</span>&#160;<span class="preprocessor">#ifndef __TGCA_VKCENTROID_HPP__</span></div><div class="line"><a name="l00025"></a><span class="lineno">   25</span>&#160;<span class="preprocessor">#define __TGCA_VKCENTROID_HPP__</span></div><div class="line"><a name="l00026"></a><span class="lineno">   26</span>&#160;</div><div class="line"><a name="l00027"></a><span class="lineno">   27</span>&#160;<span class="preprocessor">#include &lt;stdio.h&gt;</span></div><div class="line"><a name="l00028"></a><span class="lineno">   28</span>&#160;</div><div class="line"><a name="l00029"></a><span class="lineno">   29</span>&#160;<span class="preprocessor">#include &lt;vector&gt;</span></div><div class="line"><a name="l00030"></a><span class="lineno">   30</span>&#160;<span class="preprocessor">#include &lt;algorithm&gt;</span></div><div class="line"><a name="l00031"></a><span class="lineno">   31</span>&#160;<span class="preprocessor">#include &lt;cmath&gt;</span></div><div class="line"><a name="l00032"></a><span class="lineno">   32</span>&#160;<span class="preprocessor">#include &lt;stdexcept&gt;</span></div><div class="line"><a name="l00033"></a><span class="lineno">   33</span>&#160;<span class="preprocessor">#include &lt;map&gt;</span></div><div class="line"><a name="l00034"></a><span class="lineno">   34</span>&#160;</div><div class="line"><a name="l00035"></a><span class="lineno">   35</span>&#160;<span class="preprocessor">#include &lt;<a class="code" href="leac_8hpp.html">leac.hpp</a>&gt;</span></div><div class="line"><a name="l00036"></a><span class="lineno">   36</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="clustering__operator__hierarchical_8hpp.html">clustering_operator_hierarchical.hpp</a>&quot;</span></div><div class="line"><a name="l00037"></a><span class="lineno">   37</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="vector__utils_8hpp.html">vector_utils.hpp</a>&quot;</span></div><div class="line"><a name="l00038"></a><span class="lineno">   38</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="container__out_8hpp.html">container_out.hpp</a>&quot;</span></div><div class="line"><a name="l00039"></a><span class="lineno">   39</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="inparam__tgca_8hpp.html">inparam_tgca.hpp</a>&quot;</span></div><div class="line"><a name="l00040"></a><span class="lineno">   40</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="outparam__gac_8hpp.html">outparam_gac.hpp</a>&quot;</span></div><div class="line"><a name="l00041"></a><span class="lineno">   41</span>&#160;</div><div class="line"><a name="l00042"></a><span class="lineno">   42</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="plot__runtime__function_8hpp.html">plot_runtime_function.hpp</a>&quot;</span></div><div class="line"><a name="l00043"></a><span class="lineno">   43</span>&#160;</div><div class="line"><a name="l00044"></a><span class="lineno">   44</span>&#160;</div><div class="line"><a name="l00054"></a><span class="lineno">   54</span>&#160;<span class="keyword">namespace </span><a class="code" href="namespaceeac.html">eac</a> {</div><div class="line"><a name="l00055"></a><span class="lineno">   55</span>&#160; </div><div class="line"><a name="l00056"></a><span class="lineno">   56</span>&#160;</div><div class="line"><a name="l00066"></a><span class="lineno">   66</span>&#160;<span class="keyword">template</span> &lt; <span class="keyword">typename</span> CONTAINER_ITERINST,</div><div class="line"><a name="l00067"></a><span class="lineno">   67</span>&#160;           <span class="keyword">typename</span> T_CLUSTERIDX,</div><div class="line"><a name="l00068"></a><span class="lineno">   68</span>&#160;           <span class="keyword">typename</span> FUNCTION_GETATTRIBUTE</div><div class="line"><a name="l00069"></a><span class="lineno">   69</span>&#160;           &gt;</div><div class="line"><a name="l00070"></a><span class="lineno">   70</span>&#160;<span class="keyword">auto</span></div><div class="line"><a name="l00071"></a><span class="lineno">   71</span>&#160;<a class="code" href="namespaceeac.html#acbb856419d6ad4b563a5dff8119787f6">tgca_getKSegments</a></div><div class="line"><a name="l00072"></a><span class="lineno"><a class="line" href="namespaceeac.html#acbb856419d6ad4b563a5dff8119787f6">   72</a></span>&#160;(<span class="keyword">const</span> CONTAINER_ITERINST       aiiterator_instfirst,</div><div class="line"><a name="l00073"></a><span class="lineno">   73</span>&#160; <span class="keyword">const</span> CONTAINER_ITERINST       aiiterator_instlast,</div><div class="line"><a name="l00074"></a><span class="lineno">   74</span>&#160; <a class="code" href="classpartition_1_1_partition_disj_sets.html">partition::PartitionDisjSets</a>   </div><div class="line"><a name="l00075"></a><span class="lineno">   75</span>&#160; &lt;T_CLUSTERIDX&gt;                 &amp;aipartitionDisjSets_clusters,</div><div class="line"><a name="l00076"></a><span class="lineno">   76</span>&#160; FUNCTION_GETATTRIBUTE          function_getAttribute</div><div class="line"><a name="l00077"></a><span class="lineno">   77</span>&#160; ) -&gt; <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow</a>&lt;decltype(function_getAttribute(*aiiterator_instfirst))&gt;</div><div class="line"><a name="l00078"></a><span class="lineno">   78</span>&#160;{</div><div class="line"><a name="l00079"></a><span class="lineno">   79</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00080"></a><span class="lineno">   80</span>&#160;  <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelFunc = <span class="stringliteral">&quot;tgca_getKSegments&quot;</span>;</div><div class="line"><a name="l00081"></a><span class="lineno">   81</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l00082"></a><span class="lineno">   82</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00083"></a><span class="lineno">   83</span>&#160;    std::cout &lt;&lt; lpc_labelFunc </div><div class="line"><a name="l00084"></a><span class="lineno">   84</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span></div><div class="line"><a name="l00085"></a><span class="lineno">   85</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;(input  aiiterator_instfirst[&quot;</span> &lt;&lt;  *aiiterator_instfirst &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l00086"></a><span class="lineno">   86</span>&#160;              &lt;&lt; <span class="stringliteral">&quot; input  aiiterator_instlast[&quot;</span> &lt;&lt;  *aiiterator_instlast &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l00087"></a><span class="lineno">   87</span>&#160;              &lt;&lt; <span class="stringliteral">&quot; input aipartitionDisjSets_clusters[&quot;</span> &lt;&lt; &amp;aipartitionDisjSets_clusters &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l00088"></a><span class="lineno">   88</span>&#160;              &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l00089"></a><span class="lineno">   89</span>&#160;              &lt;&lt; std::endl;</div><div class="line"><a name="l00090"></a><span class="lineno">   90</span>&#160;  }</div><div class="line"><a name="l00091"></a><span class="lineno">   91</span>&#160;<span class="preprocessor">#endif //__VERBOSE_YES</span></div><div class="line"><a name="l00092"></a><span class="lineno">   92</span>&#160;</div><div class="line"><a name="l00093"></a><span class="lineno">   93</span>&#160;  <span class="keyword">typedef</span> decltype(function_getAttribute(*aiiterator_instfirst)) ResultType;</div><div class="line"><a name="l00094"></a><span class="lineno">   94</span>&#160;  </div><div class="line"><a name="l00095"></a><span class="lineno">   95</span>&#160;  <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lui_slinkK =</div><div class="line"><a name="l00096"></a><span class="lineno">   96</span>&#160;    <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>(aipartitionDisjSets_clusters.getNumCluster());</div><div class="line"><a name="l00097"></a><span class="lineno">   97</span>&#160;        </div><div class="line"><a name="l00098"></a><span class="lineno">   98</span>&#160;  <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;ResultType&gt;</a> </div><div class="line"><a name="l00099"></a><span class="lineno">   99</span>&#160;    lomatrixrowt_newMinMaxKSegments</div><div class="line"><a name="l00100"></a><span class="lineno">  100</span>&#160;    (lui_slinkK,</div><div class="line"><a name="l00101"></a><span class="lineno">  101</span>&#160;     <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>(2)</div><div class="line"><a name="l00102"></a><span class="lineno">  102</span>&#160;     );</div><div class="line"><a name="l00103"></a><span class="lineno">  103</span>&#160;</div><div class="line"><a name="l00104"></a><span class="lineno">  104</span>&#160;  <span class="comment">/*CALCULATE  KSEGMENTS</span></div><div class="line"><a name="l00105"></a><span class="lineno">  105</span>&#160;<span class="comment">   */</span> </div><div class="line"><a name="l00106"></a><span class="lineno">  106</span>&#160;  <span class="keywordflow">for</span> (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lui_iRow = 0;</div><div class="line"><a name="l00107"></a><span class="lineno">  107</span>&#160;       lui_iRow &lt; lomatrixrowt_newMinMaxKSegments.getNumRows();</div><div class="line"><a name="l00108"></a><span class="lineno">  108</span>&#160;       lui_iRow++)</div><div class="line"><a name="l00109"></a><span class="lineno">  109</span>&#160;    {</div><div class="line"><a name="l00110"></a><span class="lineno">  110</span>&#160;      lomatrixrowt_newMinMaxKSegments(lui_iRow,0) = std::numeric_limits&lt;ResultType&gt;::max();</div><div class="line"><a name="l00111"></a><span class="lineno">  111</span>&#160;      lomatrixrowt_newMinMaxKSegments(lui_iRow,1) = -std::numeric_limits&lt;ResultType&gt;::max();</div><div class="line"><a name="l00112"></a><span class="lineno">  112</span>&#160;    }</div><div class="line"><a name="l00113"></a><span class="lineno">  113</span>&#160;</div><div class="line"><a name="l00114"></a><span class="lineno">  114</span>&#160;  <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lui_idxInst = 0;</div><div class="line"><a name="l00115"></a><span class="lineno">  115</span>&#160;  <span class="keywordflow">for</span>  (<span class="keyword">auto</span> linst_iter = aiiterator_instfirst;</div><div class="line"><a name="l00116"></a><span class="lineno">  116</span>&#160;        linst_iter != aiiterator_instlast;</div><div class="line"><a name="l00117"></a><span class="lineno">  117</span>&#160;        linst_iter++)</div><div class="line"><a name="l00118"></a><span class="lineno">  118</span>&#160;    {</div><div class="line"><a name="l00119"></a><span class="lineno">  119</span>&#160;      <span class="keyword">const</span> ResultType lt_valueDim = function_getAttribute(*linst_iter); </div><div class="line"><a name="l00120"></a><span class="lineno">  120</span>&#160;      <span class="keywordflow">if</span> (lomatrixrowt_newMinMaxKSegments</div><div class="line"><a name="l00121"></a><span class="lineno">  121</span>&#160;          (aipartitionDisjSets_clusters.getClusterIdx(lui_idxInst),0) &gt; lt_valueDim) {</div><div class="line"><a name="l00122"></a><span class="lineno">  122</span>&#160;        lomatrixrowt_newMinMaxKSegments(aipartitionDisjSets_clusters.getClusterIdx(lui_idxInst),0)</div><div class="line"><a name="l00123"></a><span class="lineno">  123</span>&#160;          = lt_valueDim; </div><div class="line"><a name="l00124"></a><span class="lineno">  124</span>&#160;      }</div><div class="line"><a name="l00125"></a><span class="lineno">  125</span>&#160;      <span class="keywordflow">if</span> (lomatrixrowt_newMinMaxKSegments</div><div class="line"><a name="l00126"></a><span class="lineno">  126</span>&#160;          (aipartitionDisjSets_clusters.getClusterIdx(lui_idxInst),1) &lt; lt_valueDim) {</div><div class="line"><a name="l00127"></a><span class="lineno">  127</span>&#160;        lomatrixrowt_newMinMaxKSegments(aipartitionDisjSets_clusters.getClusterIdx(lui_idxInst),1)</div><div class="line"><a name="l00128"></a><span class="lineno">  128</span>&#160;          = lt_valueDim; </div><div class="line"><a name="l00129"></a><span class="lineno">  129</span>&#160;      }</div><div class="line"><a name="l00130"></a><span class="lineno">  130</span>&#160;      ++lui_idxInst;</div><div class="line"><a name="l00131"></a><span class="lineno">  131</span>&#160;    }</div><div class="line"><a name="l00132"></a><span class="lineno">  132</span>&#160;        </div><div class="line"><a name="l00133"></a><span class="lineno">  133</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00134"></a><span class="lineno">  134</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00135"></a><span class="lineno">  135</span>&#160;    std::cout &lt;&lt; lpc_labelFunc</div><div class="line"><a name="l00136"></a><span class="lineno">  136</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span>;</div><div class="line"><a name="l00137"></a><span class="lineno">  137</span>&#160;    std::ostringstream lostrstream_labelKiSegments;</div><div class="line"><a name="l00138"></a><span class="lineno">  138</span>&#160;    lostrstream_labelKiSegments &lt;&lt; <span class="stringliteral">&quot;&lt;KISEGMENTS:&quot;</span> &lt;&lt; lpc_labelFunc;</div><div class="line"><a name="l00139"></a><span class="lineno">  139</span>&#160;    lomatrixrowt_newMinMaxKSegments.print</div><div class="line"><a name="l00140"></a><span class="lineno">  140</span>&#160;      (std::cout,lostrstream_labelKiSegments.str().c_str(),<span class="charliteral">&#39;,&#39;</span>,<span class="charliteral">&#39;;&#39;</span>);</div><div class="line"><a name="l00141"></a><span class="lineno">  141</span>&#160;    </div><div class="line"><a name="l00142"></a><span class="lineno">  142</span>&#160;    std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l00143"></a><span class="lineno">  143</span>&#160;  }</div><div class="line"><a name="l00144"></a><span class="lineno">  144</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l00145"></a><span class="lineno">  145</span>&#160;<span class="preprocessor">#endif //__VERBOSE_YES</span></div><div class="line"><a name="l00146"></a><span class="lineno">  146</span>&#160;  </div><div class="line"><a name="l00147"></a><span class="lineno">  147</span>&#160;  <span class="keywordflow">return</span> lomatrixrowt_newMinMaxKSegments;</div><div class="line"><a name="l00148"></a><span class="lineno">  148</span>&#160;} <span class="comment">/* End */</span></div><div class="line"><a name="l00149"></a><span class="lineno">  149</span>&#160;</div><div class="line"><a name="l00150"></a><span class="lineno">  150</span>&#160;</div><div class="line"><a name="l00167"></a><span class="lineno">  167</span>&#160;<span class="keyword">template</span> &lt; <span class="keyword">typename</span> T_METRIC,</div><div class="line"><a name="l00168"></a><span class="lineno">  168</span>&#160;           <span class="keyword">typename</span> T_FEATURE,      <span class="comment">//T_STRING,    </span></div><div class="line"><a name="l00169"></a><span class="lineno">  169</span>&#160;           <span class="keyword">typename</span> T_FEATURE_SUM,</div><div class="line"><a name="l00170"></a><span class="lineno">  170</span>&#160;           <span class="keyword">typename</span> T_INSTANCES_CLUSTER_K, </div><div class="line"><a name="l00171"></a><span class="lineno">  171</span>&#160;           <span class="keyword">typename</span> T_CLUSTERIDX, <span class="comment">//-1, 0, 1, .., K</span></div><div class="line"><a name="l00172"></a><span class="lineno">  172</span>&#160;           <span class="keyword">typename</span> INPUT_ITERATOR</div><div class="line"><a name="l00173"></a><span class="lineno">  173</span>&#160;           &gt;</div><div class="line"><a name="l00174"></a><span class="lineno">  174</span>&#160;<a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;</a> </div><div class="line"><a name="l00175"></a><span class="lineno">  175</span>&#160;<a class="code" href="namespaceeac.html#a38d9061d38ffd831e162cbb6d4d0bbb4">tgca_vkcentroid</a></div><div class="line"><a name="l00176"></a><span class="lineno"><a class="line" href="namespaceeac.html#a38d9061d38ffd831e162cbb6d4d0bbb4">  176</a></span>&#160;(<a class="code" href="classinout_1_1_out_param_g_a_c.html">inout::OutParamGAC</a></div><div class="line"><a name="l00177"></a><span class="lineno">  177</span>&#160; &lt;T_METRIC,</div><div class="line"><a name="l00178"></a><span class="lineno">  178</span>&#160; T_CLUSTERIDX&gt;                         &amp;aoop_outParamGAC,</div><div class="line"><a name="l00179"></a><span class="lineno">  179</span>&#160; <a class="code" href="classinout_1_1_in_param_t_g_c_a.html">inout::InParamTGCA</a></div><div class="line"><a name="l00180"></a><span class="lineno">  180</span>&#160; &lt;T_CLUSTERIDX,</div><div class="line"><a name="l00181"></a><span class="lineno">  181</span>&#160; T_METRIC,</div><div class="line"><a name="l00182"></a><span class="lineno">  182</span>&#160; T_FEATURE,</div><div class="line"><a name="l00183"></a><span class="lineno">  183</span>&#160; T_FEATURE_SUM,</div><div class="line"><a name="l00184"></a><span class="lineno">  184</span>&#160; T_INSTANCES_CLUSTER_K&gt;                &amp;aiinp_inParamTGCA,</div><div class="line"><a name="l00185"></a><span class="lineno">  185</span>&#160; <span class="keyword">const</span> INPUT_ITERATOR                  aiiterator_instfirst,</div><div class="line"><a name="l00186"></a><span class="lineno">  186</span>&#160; <span class="keyword">const</span> INPUT_ITERATOR                  aiiterator_instlast,</div><div class="line"><a name="l00187"></a><span class="lineno">  187</span>&#160; <span class="keyword">const</span> <a class="code" href="structdist_1_1_dist.html">dist::Dist&lt;T_METRIC,T_FEATURE&gt;</a>  &amp;aifunc2p_dist</div><div class="line"><a name="l00188"></a><span class="lineno">  188</span>&#160; )</div><div class="line"><a name="l00189"></a><span class="lineno">  189</span>&#160;{</div><div class="line"><a name="l00190"></a><span class="lineno">  190</span>&#160;</div><div class="line"><a name="l00191"></a><span class="lineno">  191</span>&#160;  <span class="keyword">const</span> <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>  lui_numInstances = <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>(std::distance(aiiterator_instfirst,aiiterator_instlast));</div><div class="line"><a name="l00192"></a><span class="lineno">  192</span>&#160;  </div><div class="line"><a name="l00193"></a><span class="lineno">  193</span>&#160;  <span class="keywordflow">if</span> ( aiinp_inParamTGCA.getNumClusterKMaximum() == </div><div class="line"><a name="l00194"></a><span class="lineno">  194</span>&#160;       <a class="code" href="inparam__variablek_8hpp.html#aeb7d10f56da8d5c8965362a37ae94d02">INPARAMCLUSTERING_DEFAULT_CLUSTERK_UNDEFINED</a> )</div><div class="line"><a name="l00195"></a><span class="lineno">  195</span>&#160;    aiinp_inParamTGCA.setNumClusterKMaximum</div><div class="line"><a name="l00196"></a><span class="lineno">  196</span>&#160;      (std::round(std::sqrt((<span class="keywordtype">double</span>)lui_numInstances)));</div><div class="line"><a name="l00197"></a><span class="lineno">  197</span>&#160;  </div><div class="line"><a name="l00198"></a><span class="lineno">  198</span>&#160;  <a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;</a> </div><div class="line"><a name="l00199"></a><span class="lineno">  199</span>&#160;    lochrom_best;</div><div class="line"><a name="l00200"></a><span class="lineno">  200</span>&#160;    </div><div class="line"><a name="l00201"></a><span class="lineno">  201</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00202"></a><span class="lineno">  202</span>&#160;  </div><div class="line"><a name="l00203"></a><span class="lineno">  203</span>&#160;  <span class="comment">/*ID PROC</span></div><div class="line"><a name="l00204"></a><span class="lineno">  204</span>&#160;<span class="comment">   */</span></div><div class="line"><a name="l00205"></a><span class="lineno">  205</span>&#160;  geverboseui_idproc = 0;</div><div class="line"><a name="l00206"></a><span class="lineno">  206</span>&#160;  </div><div class="line"><a name="l00207"></a><span class="lineno">  207</span>&#160;  ++geiinparam_verbose;</div><div class="line"><a name="l00208"></a><span class="lineno">  208</span>&#160;  <span class="keyword">const</span> <span class="keywordtype">char</span>* lpc_labelAlgGA = <span class="stringliteral">&quot;tgca_vkcentroid:&quot;</span>;</div><div class="line"><a name="l00209"></a><span class="lineno">  209</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00210"></a><span class="lineno">  210</span>&#160;    std::cout &lt;&lt; lpc_labelAlgGA</div><div class="line"><a name="l00211"></a><span class="lineno">  211</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span></div><div class="line"><a name="l00212"></a><span class="lineno">  212</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\t(output inout::OutParamGAC&amp;: aoop_outParamGAC[&quot;</span> </div><div class="line"><a name="l00213"></a><span class="lineno">  213</span>&#160;              &lt;&lt; &amp;aoop_outParamGAC &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l00214"></a><span class="lineno">  214</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\t input  InParamClusteringGaProbFk&amp;: aiinp_inParamTGCA[&quot;</span> </div><div class="line"><a name="l00215"></a><span class="lineno">  215</span>&#160;              &lt;&lt; &amp;aiinp_inParamTGCA &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l00216"></a><span class="lineno">  216</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\t input aiiterator_instfirst[&quot;</span> &lt;&lt; *aiiterator_instfirst &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l00217"></a><span class="lineno">  217</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\t input aiiterator_instlast[&quot;</span> &lt;&lt;  &amp;aiiterator_instlast &lt;&lt; <span class="stringliteral">&quot;]\n&quot;</span></div><div class="line"><a name="l00218"></a><span class="lineno">  218</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\t input  dist::Dist&lt;T_METRIC,T_FEATURE&gt; &amp;aifunc2p_dist[&quot;</span> </div><div class="line"><a name="l00219"></a><span class="lineno">  219</span>&#160;              &lt;&lt; &amp;aifunc2p_dist &lt;&lt; <span class="charliteral">&#39;]&#39;</span></div><div class="line"><a name="l00220"></a><span class="lineno">  220</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\n\t\tPopulation size = &quot;</span> </div><div class="line"><a name="l00221"></a><span class="lineno">  221</span>&#160;              &lt;&lt; aiinp_inParamTGCA.getSizePopulation()</div><div class="line"><a name="l00222"></a><span class="lineno">  222</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\n\t\tProbCrossover = &quot;</span> </div><div class="line"><a name="l00223"></a><span class="lineno">  223</span>&#160;              &lt;&lt; aiinp_inParamTGCA.getProbCrossover()</div><div class="line"><a name="l00224"></a><span class="lineno">  224</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\n\t\tk-minimum  = &quot;</span> </div><div class="line"><a name="l00225"></a><span class="lineno">  225</span>&#160;              &lt;&lt; aiinp_inParamTGCA.getNumClusterKMinimum()</div><div class="line"><a name="l00226"></a><span class="lineno">  226</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\n\t\tk-maximum  = &quot;</span> </div><div class="line"><a name="l00227"></a><span class="lineno">  227</span>&#160;              &lt;&lt; aiinp_inParamTGCA.getNumClusterKMaximum()</div><div class="line"><a name="l00228"></a><span class="lineno">  228</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\n\t\trandom-seed = &quot;</span></div><div class="line"><a name="l00229"></a><span class="lineno">  229</span>&#160;              &lt;&lt; aiinp_inParamTGCA.getRandomSeed()</div><div class="line"><a name="l00230"></a><span class="lineno">  230</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;\n\t)&quot;</span></div><div class="line"><a name="l00231"></a><span class="lineno">  231</span>&#160;              &lt;&lt; std::endl;</div><div class="line"><a name="l00232"></a><span class="lineno">  232</span>&#160;  }</div><div class="line"><a name="l00233"></a><span class="lineno">  233</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"> </span></div><div class="line"><a name="l00234"></a><span class="lineno">  234</span>&#160;</div><div class="line"><a name="l00235"></a><span class="lineno">  235</span>&#160;</div><div class="line"><a name="l00236"></a><span class="lineno">  236</span>&#160;  <a class="code" href="classruntime_1_1_list_runtime_function.html">runtime::ListRuntimeFunction&lt;COMMON_IDOMAIN&gt;</a> </div><div class="line"><a name="l00237"></a><span class="lineno">  237</span>&#160;    llfh_listFuntionHist</div><div class="line"><a name="l00238"></a><span class="lineno">  238</span>&#160;    (aiinp_inParamTGCA.getNumMaxGenerations(), <span class="stringliteral">&quot;Iterations&quot;</span>, <span class="stringliteral">&quot;Clustering metrics&quot;</span>);</div><div class="line"><a name="l00239"></a><span class="lineno">  239</span>&#160;</div><div class="line"><a name="l00240"></a><span class="lineno">  240</span>&#160;  <span class="comment">/*DECLARATION OF VARIABLES: COMPUTING STATISTICAL AND METRIC OF THE ALGORITHM</span></div><div class="line"><a name="l00241"></a><span class="lineno">  241</span>&#160;<span class="comment">   */</span></div><div class="line"><a name="l00242"></a><span class="lineno">  242</span>&#160;<span class="preprocessor">#ifndef __WITHOUT_PLOT_STAT</span></div><div class="line"><a name="l00243"></a><span class="lineno">  243</span>&#160;  std::ofstream                           lfileout_plotStatObjetiveFunc;</div><div class="line"><a name="l00244"></a><span class="lineno">  244</span>&#160;  <a class="code" href="classruntime_1_1_runtime_function_value.html">runtime::RuntimeFunctionValue&lt;T_METRIC&gt;</a> *lofh_objetiveFunc = NULL;</div><div class="line"><a name="l00245"></a><span class="lineno">  245</span>&#160;  <a class="code" href="classruntime_1_1_runtime_function_stat.html">runtime::RuntimeFunctionStat&lt;T_METRIC&gt;</a>  *lofhs_statObjectiveFunc[<a class="code" href="runtime__statistic_8hpp.html#a821c6beac41497051d4d05d51f4ae4d7">STATISTICAL_ALL_MEASURES</a>];</div><div class="line"><a name="l00246"></a><span class="lineno">  246</span>&#160;  std::vector&lt;T_METRIC&gt;                   lvectort_statfuncObjetiveFunc;</div><div class="line"><a name="l00247"></a><span class="lineno">  247</span>&#160;  </div><div class="line"><a name="l00248"></a><span class="lineno">  248</span>&#160;  <span class="keywordflow">if</span> ( aiinp_inParamTGCA.getWithPlotStatObjetiveFunc() ) {  </div><div class="line"><a name="l00249"></a><span class="lineno">  249</span>&#160;    </div><div class="line"><a name="l00250"></a><span class="lineno">  250</span>&#160;    lvectort_statfuncObjetiveFunc.reserve</div><div class="line"><a name="l00251"></a><span class="lineno">  251</span>&#160;      ( aiinp_inParamTGCA.getSizePopulation());</div><div class="line"><a name="l00252"></a><span class="lineno">  252</span>&#160;    <span class="comment">//DEFINE FUNCTION</span></div><div class="line"><a name="l00253"></a><span class="lineno">  253</span>&#160;    lofh_objetiveFunc  = <span class="keyword">new</span> <a class="code" href="classruntime_1_1_runtime_function_value.html">runtime::RuntimeFunctionValue&lt;T_METRIC&gt;</a></div><div class="line"><a name="l00254"></a><span class="lineno">  254</span>&#160;      (<span class="stringliteral">&quot;DB&quot;</span>, </div><div class="line"><a name="l00255"></a><span class="lineno">  255</span>&#160;       aiinp_inParamTGCA.getAlgorithmoName(),</div><div class="line"><a name="l00256"></a><span class="lineno">  256</span>&#160;       <a class="code" href="runtime__function_8hpp.html#a11402450dc3137a8e9b7ea1ee32403a1">RUNTIMEFUNCTION_NOT_STORAGE</a></div><div class="line"><a name="l00257"></a><span class="lineno">  257</span>&#160;       );</div><div class="line"><a name="l00258"></a><span class="lineno">  258</span>&#160;</div><div class="line"><a name="l00259"></a><span class="lineno">  259</span>&#160;    llfh_listFuntionHist.addFuntion(lofh_objetiveFunc);</div><div class="line"><a name="l00260"></a><span class="lineno">  260</span>&#160;</div><div class="line"><a name="l00261"></a><span class="lineno">  261</span>&#160;    <span class="comment">//DEFINE FUNCTION STATISTICAL</span></div><div class="line"><a name="l00262"></a><span class="lineno">  262</span>&#160;    <span class="keywordflow">for</span>  (<span class="keywordtype">int</span> <a class="code" href="namespaceinout.html#a58988b65e7b78cbd7c509518c7baff7e">li_i</a> = 0; <a class="code" href="namespaceinout.html#a58988b65e7b78cbd7c509518c7baff7e">li_i</a> &lt; <a class="code" href="runtime__statistic_8hpp.html#a821c6beac41497051d4d05d51f4ae4d7">STATISTICAL_ALL_MEASURES</a>; <a class="code" href="namespaceinout.html#a58988b65e7b78cbd7c509518c7baff7e">li_i</a>++) {</div><div class="line"><a name="l00263"></a><span class="lineno">  263</span>&#160;      lofhs_statObjectiveFunc[<a class="code" href="namespaceinout.html#a58988b65e7b78cbd7c509518c7baff7e">li_i</a>] = </div><div class="line"><a name="l00264"></a><span class="lineno">  264</span>&#160;        <span class="keyword">new</span> <a class="code" href="classruntime_1_1_runtime_function_stat.html">runtime::RuntimeFunctionStat</a></div><div class="line"><a name="l00265"></a><span class="lineno">  265</span>&#160;        &lt;T_METRIC&gt;</div><div class="line"><a name="l00266"></a><span class="lineno">  266</span>&#160;        ( (char) <a class="code" href="namespaceinout.html#a58988b65e7b78cbd7c509518c7baff7e">li_i</a>,</div><div class="line"><a name="l00267"></a><span class="lineno">  267</span>&#160;          aiinp_inParamTGCA.getAlgorithmoName(),</div><div class="line"><a name="l00268"></a><span class="lineno">  268</span>&#160;          <a class="code" href="runtime__function_8hpp.html#a11402450dc3137a8e9b7ea1ee32403a1">RUNTIMEFUNCTION_NOT_STORAGE</a></div><div class="line"><a name="l00269"></a><span class="lineno">  269</span>&#160;          );</div><div class="line"><a name="l00270"></a><span class="lineno">  270</span>&#160;      llfh_listFuntionHist.addFuntion(lofhs_statObjectiveFunc[<a class="code" href="namespaceinout.html#a58988b65e7b78cbd7c509518c7baff7e">li_i</a>]);</div><div class="line"><a name="l00271"></a><span class="lineno">  271</span>&#160;    }</div><div class="line"><a name="l00272"></a><span class="lineno">  272</span>&#160;  </div><div class="line"><a name="l00273"></a><span class="lineno">  273</span>&#160;    <span class="comment">//OPEN FILE STRORE FUNCTION</span></div><div class="line"><a name="l00274"></a><span class="lineno">  274</span>&#160;    aoop_outParamGAC.setFileNameOutPlotStatObjetiveFunc</div><div class="line"><a name="l00275"></a><span class="lineno">  275</span>&#160;      (aiinp_inParamTGCA.getFileNamePlotStatObjetiveFunc(),</div><div class="line"><a name="l00276"></a><span class="lineno">  276</span>&#160;       aiinp_inParamTGCA.getTimesRunAlgorithm()</div><div class="line"><a name="l00277"></a><span class="lineno">  277</span>&#160;       );</div><div class="line"><a name="l00278"></a><span class="lineno">  278</span>&#160;</div><div class="line"><a name="l00279"></a><span class="lineno">  279</span>&#160;    lfileout_plotStatObjetiveFunc.open</div><div class="line"><a name="l00280"></a><span class="lineno">  280</span>&#160;      (aoop_outParamGAC.getFileNameOutPlotStatObjetiveFunc().c_str(),</div><div class="line"><a name="l00281"></a><span class="lineno">  281</span>&#160;       std::ios::out | std::ios::app</div><div class="line"><a name="l00282"></a><span class="lineno">  282</span>&#160;       );</div><div class="line"><a name="l00283"></a><span class="lineno">  283</span>&#160;</div><div class="line"><a name="l00284"></a><span class="lineno">  284</span>&#160;    lfileout_plotStatObjetiveFunc.precision(<a class="code" href="common_8hpp.html#ab23a980e24a9b9cf5356bf87aaf02a4a">COMMON_COUT_PRECISION</a>);</div><div class="line"><a name="l00285"></a><span class="lineno">  285</span>&#160;</div><div class="line"><a name="l00286"></a><span class="lineno">  286</span>&#160;    <span class="comment">//FUNCTION HEADER</span></div><div class="line"><a name="l00287"></a><span class="lineno">  287</span>&#160;</div><div class="line"><a name="l00288"></a><span class="lineno">  288</span>&#160;    lfileout_plotStatObjetiveFunc </div><div class="line"><a name="l00289"></a><span class="lineno">  289</span>&#160;      &lt;&lt;  llfh_listFuntionHist.<a class="code" href="classruntime_1_1_list_runtime_function.html#a2dd9ac78935607a1c992c1e396897486">getHeaderFuntions</a>() </div><div class="line"><a name="l00290"></a><span class="lineno">  290</span>&#160;      &lt;&lt; <span class="stringliteral">&quot;\n&quot;</span>;</div><div class="line"><a name="l00291"></a><span class="lineno">  291</span>&#160;  }</div><div class="line"><a name="l00292"></a><span class="lineno">  292</span>&#160;</div><div class="line"><a name="l00293"></a><span class="lineno">  293</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__WITHOUT_PLOT_STAT*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00294"></a><span class="lineno">  294</span>&#160;  </div><div class="line"><a name="l00295"></a><span class="lineno">  295</span>&#160; </div><div class="line"><a name="l00296"></a><span class="lineno">  296</span>&#160;  <span class="comment">/*WHEN CAN MEASURE STARTS AT ZERO INVALID OFFSPRING</span></div><div class="line"><a name="l00297"></a><span class="lineno">  297</span>&#160;<span class="comment">   */</span></div><div class="line"><a name="l00298"></a><span class="lineno">  298</span>&#160;  aoop_outParamGAC.setTotalInvalidOffspring(0);</div><div class="line"><a name="l00299"></a><span class="lineno">  299</span>&#160;</div><div class="line"><a name="l00300"></a><span class="lineno">  300</span>&#160;  <span class="comment">/*OUT: GENETIC ALGORITHM CHARACTERIZATION*/</span></div><div class="line"><a name="l00301"></a><span class="lineno">  301</span>&#160;</div><div class="line"><a name="l00302"></a><span class="lineno">  302</span>&#160;  <a class="code" href="namespaceruntime.html#a8dd0360926fc272cb3a627baf1132157">runtime::ExecutionTime</a> let_executionTime = <a class="code" href="namespaceruntime.html#aa9ffc08cd526dab9f19a9a4000741a25">runtime::start</a>();</div><div class="line"><a name="l00303"></a><span class="lineno">  303</span>&#160;</div><div class="line"><a name="l00304"></a><span class="lineno">  304</span>&#160;  std::uniform_int_distribution&lt;T_CLUSTERIDX&gt;</div><div class="line"><a name="l00305"></a><span class="lineno">  305</span>&#160;    uniformdis_mmcidxMinMaxK</div><div class="line"><a name="l00306"></a><span class="lineno">  306</span>&#160;    (aiinp_inParamTGCA.getNumClusterKMinimum(), </div><div class="line"><a name="l00307"></a><span class="lineno">  307</span>&#160;     aiinp_inParamTGCA.getNumClusterKMaximum()</div><div class="line"><a name="l00308"></a><span class="lineno">  308</span>&#160;     );</div><div class="line"><a name="l00309"></a><span class="lineno">  309</span>&#160;  std::uniform_real_distribution&lt;T_METRIC&gt; uniformdis_real01(0, 1);</div><div class="line"><a name="l00310"></a><span class="lineno">  310</span>&#160;  std::uniform_int_distribution&lt;uintidx&gt; uniformdis_idxInstances</div><div class="line"><a name="l00311"></a><span class="lineno">  311</span>&#160;    (0,lui_numInstances-1);</div><div class="line"><a name="l00312"></a><span class="lineno">  312</span>&#160;    </div><div class="line"><a name="l00313"></a><span class="lineno">  313</span>&#160;  <span class="comment">/*VARIABLE NEED FOR POPULATION</span></div><div class="line"><a name="l00314"></a><span class="lineno">  314</span>&#160;<span class="comment">   */</span></div><div class="line"><a name="l00315"></a><span class="lineno">  315</span>&#160;  std::vector&lt;gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;* &gt;  </div><div class="line"><a name="l00316"></a><span class="lineno">  316</span>&#160;    lvectorchrom_population;</div><div class="line"><a name="l00317"></a><span class="lineno">  317</span>&#160;  </div><div class="line"><a name="l00318"></a><span class="lineno">  318</span>&#160;  T_FEATURE *larray_maxFeactures =</div><div class="line"><a name="l00319"></a><span class="lineno">  319</span>&#160;    <span class="keyword">new</span> T_FEATURE[<a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>()];</div><div class="line"><a name="l00320"></a><span class="lineno">  320</span>&#160;</div><div class="line"><a name="l00321"></a><span class="lineno">  321</span>&#160;  T_FEATURE *larray_minFeactures =</div><div class="line"><a name="l00322"></a><span class="lineno">  322</span>&#160;    <span class="keyword">new</span> T_FEATURE[<a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>()];</div><div class="line"><a name="l00323"></a><span class="lineno">  323</span>&#160;</div><div class="line"><a name="l00324"></a><span class="lineno">  324</span>&#160;  <a class="code" href="namespacestats.html#a61fb958f0ffbfa6d41efd10f6e71f062">stats::maxFeatures</a></div><div class="line"><a name="l00325"></a><span class="lineno">  325</span>&#160;    (larray_maxFeactures,</div><div class="line"><a name="l00326"></a><span class="lineno">  326</span>&#160;     aiiterator_instfirst,</div><div class="line"><a name="l00327"></a><span class="lineno">  327</span>&#160;     aiiterator_instlast</div><div class="line"><a name="l00328"></a><span class="lineno">  328</span>&#160;     );</div><div class="line"><a name="l00329"></a><span class="lineno">  329</span>&#160;</div><div class="line"><a name="l00330"></a><span class="lineno">  330</span>&#160;  <a class="code" href="namespacestats.html#ad05deabf843908b6a0be813c39a346cd">stats::minFeatures</a></div><div class="line"><a name="l00331"></a><span class="lineno">  331</span>&#160;    (larray_minFeactures,</div><div class="line"><a name="l00332"></a><span class="lineno">  332</span>&#160;     aiiterator_instfirst,</div><div class="line"><a name="l00333"></a><span class="lineno">  333</span>&#160;     aiiterator_instlast</div><div class="line"><a name="l00334"></a><span class="lineno">  334</span>&#160;     ); </div><div class="line"><a name="l00335"></a><span class="lineno">  335</span>&#160;  </div><div class="line"><a name="l00336"></a><span class="lineno">  336</span>&#160;  <span class="comment">/*1. INITIALIZATION-----------------------------------------------------------</span></div><div class="line"><a name="l00337"></a><span class="lineno">  337</span>&#160;<span class="comment">    1. Initialization</span></div><div class="line"><a name="l00338"></a><span class="lineno">  338</span>&#160;<span class="comment">    a) Input object number M, iteration number Gm , crossover</span></div><div class="line"><a name="l00339"></a><span class="lineno">  339</span>&#160;<span class="comment">    probability Pc , evolutionary population N, and array of the</span></div><div class="line"><a name="l00340"></a><span class="lineno">  340</span>&#160;<span class="comment">    numbers of clusters, i.e. K = {k1,k2,...,kN}.</span></div><div class="line"><a name="l00341"></a><span class="lineno">  341</span>&#160;<span class="comment">    b) Adopt the maximum attribute range partition method to</span></div><div class="line"><a name="l00342"></a><span class="lineno">  342</span>&#160;<span class="comment">    choose initial cluster centers for N times to form N initial</span></div><div class="line"><a name="l00343"></a><span class="lineno">  343</span>&#160;<span class="comment">    individuals.</span></div><div class="line"><a name="l00344"></a><span class="lineno">  344</span>&#160;<span class="comment">  */</span></div><div class="line"><a name="l00345"></a><span class="lineno">  345</span>&#160;</div><div class="line"><a name="l00346"></a><span class="lineno">  346</span>&#160;<span class="preprocessor">#ifndef __INITIALIZATION_RANDOM_SAMPLING__</span></div><div class="line"><a name="l00347"></a><span class="lineno">  347</span>&#160;  </div><div class="line"><a name="l00348"></a><span class="lineno">  348</span>&#160;  <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>  lui_idxAttMaxRange;</div><div class="line"><a name="l00349"></a><span class="lineno">  349</span>&#160;  <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>* larrayiu_pi = NULL;</div><div class="line"><a name="l00350"></a><span class="lineno">  350</span>&#160;  T_METRIC*  larrayrt_lambda = NULL;</div><div class="line"><a name="l00351"></a><span class="lineno">  351</span>&#160;</div><div class="line"><a name="l00352"></a><span class="lineno">  352</span>&#160;  std::vector&lt;std::pair&lt;uintidx,T_METRIC&gt; &gt; lvector_pairIdxLambda;</div><div class="line"><a name="l00353"></a><span class="lineno">  353</span>&#160;  std::map&lt;T_CLUSTERIDX,mat::MatrixRow&lt;T_FEATURE&gt; &gt; lmap_kSegments;</div><div class="line"><a name="l00354"></a><span class="lineno">  354</span>&#160;  </div><div class="line"><a name="l00355"></a><span class="lineno">  355</span>&#160;  <span class="keywordflow">try</span> {</div><div class="line"><a name="l00356"></a><span class="lineno">  356</span>&#160;    larrayiu_pi     = <span class="keyword">new</span> <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>[lui_numInstances];</div><div class="line"><a name="l00357"></a><span class="lineno">  357</span>&#160;    larrayrt_lambda = <span class="keyword">new</span> T_METRIC[lui_numInstances];</div><div class="line"><a name="l00358"></a><span class="lineno">  358</span>&#160;  }</div><div class="line"><a name="l00359"></a><span class="lineno">  359</span>&#160;  <span class="keywordflow">catch</span> (std::bad_alloc&amp; ba) {</div><div class="line"><a name="l00360"></a><span class="lineno">  360</span>&#160;    std::cerr &lt;&lt; <span class="stringliteral">&quot;bad_alloc caught in alg_slink_sibson1973.hpp: &quot;</span> &lt;&lt; ba.what() &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l00361"></a><span class="lineno">  361</span>&#160;  }</div><div class="line"><a name="l00362"></a><span class="lineno">  362</span>&#160;</div><div class="line"><a name="l00363"></a><span class="lineno">  363</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__INITIALIZATION RANDOM SAMPLING__*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00364"></a><span class="lineno">  364</span>&#160;</div><div class="line"><a name="l00365"></a><span class="lineno">  365</span>&#160;  </div><div class="line"><a name="l00366"></a><span class="lineno">  366</span>&#160;  </div><div class="line"><a name="l00367"></a><span class="lineno">  367</span>&#160;  {<span class="comment">/*BEGIN INITIALIZATION*/</span></div><div class="line"><a name="l00368"></a><span class="lineno">  368</span>&#160;</div><div class="line"><a name="l00369"></a><span class="lineno">  369</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00370"></a><span class="lineno">  370</span>&#160;    geverbosepc_labelstep = <span class="stringliteral">&quot;1. POPULATION INITIALIZATION&quot;</span>;</div><div class="line"><a name="l00371"></a><span class="lineno">  371</span>&#160;    ++geiinparam_verbose;</div><div class="line"><a name="l00372"></a><span class="lineno">  372</span>&#160;    <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00373"></a><span class="lineno">  373</span>&#160;      std::cout &lt;&lt; geverbosepc_labelstep  </div><div class="line"><a name="l00374"></a><span class="lineno">  374</span>&#160;                &lt;&lt; <span class="stringliteral">&quot;: IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l00375"></a><span class="lineno">  375</span>&#160;                &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;population_size = &quot;</span> &lt;&lt; lvectorchrom_population.size()</div><div class="line"><a name="l00376"></a><span class="lineno">  376</span>&#160;                &lt;&lt; std::endl;</div><div class="line"><a name="l00377"></a><span class="lineno">  377</span>&#160;    }</div><div class="line"><a name="l00378"></a><span class="lineno">  378</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00379"></a><span class="lineno">  379</span>&#160;</div><div class="line"><a name="l00380"></a><span class="lineno">  380</span>&#160;    <span class="comment">/*CREATE SPACE FOR STORE POPULATION</span></div><div class="line"><a name="l00381"></a><span class="lineno">  381</span>&#160;<span class="comment">     */</span></div><div class="line"><a name="l00382"></a><span class="lineno">  382</span>&#160;    lvectorchrom_population.reserve</div><div class="line"><a name="l00383"></a><span class="lineno">  383</span>&#160;      (aiinp_inParamTGCA.getSizePopulation());</div><div class="line"><a name="l00384"></a><span class="lineno">  384</span>&#160;     </div><div class="line"><a name="l00385"></a><span class="lineno">  385</span>&#160;    <span class="comment">/*CHROMOSOME INITIALIZATION</span></div><div class="line"><a name="l00386"></a><span class="lineno">  386</span>&#160;<span class="comment">     */</span></div><div class="line"><a name="l00387"></a><span class="lineno">  387</span>&#160;<span class="preprocessor">#ifdef __INITIALIZATION_RANDOM_SAMPLING__</span></div><div class="line"><a name="l00388"></a><span class="lineno">  388</span>&#160;</div><div class="line"><a name="l00389"></a><span class="lineno">  389</span>&#160;    <span class="keywordflow">for</span> (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> luintidx_i = 0; </div><div class="line"><a name="l00390"></a><span class="lineno">  390</span>&#160;         luintidx_i &lt; aiinp_inParamTGCA.getSizePopulation(); </div><div class="line"><a name="l00391"></a><span class="lineno">  391</span>&#160;         luintidx_i++) </div><div class="line"><a name="l00392"></a><span class="lineno">  392</span>&#160;      {</div><div class="line"><a name="l00393"></a><span class="lineno">  393</span>&#160;        <span class="comment">/*Generate a number Ki in range Kmin to Kmax</span></div><div class="line"><a name="l00394"></a><span class="lineno">  394</span>&#160;<span class="comment">         */</span></div><div class="line"><a name="l00395"></a><span class="lineno">  395</span>&#160;        <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lui_krand =</div><div class="line"><a name="l00396"></a><span class="lineno">  396</span>&#160;          <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>(uniformdis_mmcidxMinMaxK(<a class="code" href="clustering__operator__centroids_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>));</div><div class="line"><a name="l00397"></a><span class="lineno">  397</span>&#160;        </div><div class="line"><a name="l00398"></a><span class="lineno">  398</span>&#160;        <a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;</a> *lchrom_new=</div><div class="line"><a name="l00399"></a><span class="lineno">  399</span>&#160; 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          lchrom_new-&gt;<a class="code" href="classgaencode_1_1_chrom_variable_length.html#ad2f7938aabc7bb8175344e36b372934d">getString</a>()</div><div class="line"><a name="l00407"></a><span class="lineno">  407</span>&#160;           );</div><div class="line"><a name="l00408"></a><span class="lineno">  408</span>&#160;</div><div class="line"><a name="l00409"></a><span class="lineno">  409</span>&#160;        std::unordered_set&lt;uintidx&gt;&amp;&amp; lunorderedset_idxRandInstances =</div><div class="line"><a name="l00410"></a><span class="lineno">  410</span>&#160;          <a class="code" href="namespaceprob.html#a15090755bafc59aa295f2d02be64af8c">prob::getWithoutRepeatsSet</a></div><div class="line"><a name="l00411"></a><span class="lineno">  411</span>&#160;          ( lmatrixrowt_centroidsChrom.getNumRows(),</div><div class="line"><a name="l00412"></a><span class="lineno">  412</span>&#160;            [&amp;]() -&gt; <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a></div><div class="line"><a name="l00413"></a><span class="lineno">  413</span>&#160;            {</div><div class="line"><a name="l00414"></a><span class="lineno">  414</span>&#160;              <span class="keywordflow">return</span> uniformdis_idxInstances(<a class="code" href="clustering__operator__centroids_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l00415"></a><span class="lineno">  415</span>&#160;            }</div><div class="line"><a name="l00416"></a><span class="lineno">  416</span>&#160;            );</div><div class="line"><a name="l00417"></a><span class="lineno">  417</span>&#160;         </div><div class="line"><a name="l00418"></a><span class="lineno">  418</span>&#160;        centroids::centroidsInitialized</div><div class="line"><a name="l00419"></a><span class="lineno">  419</span>&#160;          (lmatrixrowt_centroidsChrom, </div><div class="line"><a name="l00420"></a><span class="lineno">  420</span>&#160;           aiiterator_instfirst,</div><div class="line"><a name="l00421"></a><span class="lineno">  421</span>&#160;           lunorderedset_idxRandInstances.begin()</div><div class="line"><a name="l00422"></a><span class="lineno">  422</span>&#160;           );</div><div class="line"><a name="l00423"></a><span class="lineno">  423</span>&#160;</div><div class="line"><a name="l00424"></a><span class="lineno">  424</span>&#160;        lchrom_new-&gt;<a class="code" href="classgaencode_1_1_chromosome_base.html#ab136d6f70ea068097d764e5bc34015e1">setFitness</a>(<a class="code" href="unsupervised__measures_8hpp.html#aed2d7fec3655cf98554603a6b34bbd96">measuare_undefVRC</a>(T_METRIC));    </div><div class="line"><a name="l00425"></a><span class="lineno">  425</span>&#160;        lchrom_new-&gt;<a class="code" href="classgaencode_1_1_chromosome_base.html#a0c0f339b486fb7d097d2afac2539ddc8">setObjetiveFunc</a>(<a class="code" href="unsupervised__measures_8hpp.html#aed2d7fec3655cf98554603a6b34bbd96">measuare_undefVRC</a>(T_METRIC));</div><div class="line"><a name="l00426"></a><span class="lineno">  426</span>&#160;</div><div class="line"><a name="l00427"></a><span class="lineno">  427</span>&#160;        lvectorchrom_population.push_back( lchrom_new );</div><div class="line"><a name="l00428"></a><span class="lineno">  428</span>&#160;        </div><div class="line"><a name="l00429"></a><span class="lineno">  429</span>&#160;      }</div><div class="line"><a name="l00430"></a><span class="lineno">  430</span>&#160;    </div><div class="line"><a name="l00431"></a><span class="lineno">  431</span>&#160;<span class="preprocessor">#else </span><span class="comment">/*PROPOSED BY THE AUTHOR*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00432"></a><span class="lineno">  432</span>&#160;</div><div class="line"><a name="l00433"></a><span class="lineno">  433</span>&#160;      <span class="comment">/*attribute with maximum range is vm , and its maximum range Rm</span></div><div class="line"><a name="l00434"></a><span class="lineno">  434</span>&#160;<span class="comment">        is [vm1,vm2].</span></div><div class="line"><a name="l00435"></a><span class="lineno">  435</span>&#160;<span class="comment">      */</span></div><div class="line"><a name="l00436"></a><span class="lineno">  436</span>&#160; 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           aiinst_b-&gt;<a class="code" href="classdata_1_1_instance.html#a922f0985a9b7d465b340831dcd540d83">getAttribute</a>(lui_idxAttMaxRange)</div><div class="line"><a name="l00460"></a><span class="lineno">  460</span>&#160;            );</div><div class="line"><a name="l00461"></a><span class="lineno">  461</span>&#160;       }</div><div class="line"><a name="l00462"></a><span class="lineno">  462</span>&#160;       );</div><div class="line"><a name="l00463"></a><span class="lineno">  463</span>&#160;</div><div class="line"><a name="l00464"></a><span class="lineno">  464</span>&#160;    lvector_pairIdxLambda = </div><div class="line"><a name="l00465"></a><span class="lineno">  465</span>&#160;      <a class="code" href="namespaceclusteringop.html#a7fadea9ded0a7c876b8f58c3f303d316">clusteringop::sortLambda</a></div><div class="line"><a name="l00466"></a><span class="lineno">  466</span>&#160;      (larrayiu_pi,</div><div class="line"><a name="l00467"></a><span class="lineno">  467</span>&#160;       larrayrt_lambda,</div><div class="line"><a name="l00468"></a><span class="lineno">  468</span>&#160;       lui_numInstances</div><div class="line"><a name="l00469"></a><span class="lineno">  469</span>&#160;       );</div><div class="line"><a name="l00470"></a><span class="lineno">  470</span>&#160;</div><div class="line"><a name="l00471"></a><span class="lineno">  471</span>&#160;    <span class="keywordflow">for</span> (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> luintidx_i = 0; </div><div class="line"><a name="l00472"></a><span class="lineno">  472</span>&#160;         luintidx_i &lt; aiinp_inParamTGCA.getSizePopulation(); </div><div class="line"><a name="l00473"></a><span class="lineno">  473</span>&#160;         luintidx_i++) </div><div class="line"><a name="l00474"></a><span class="lineno">  474</span>&#160;      {</div><div class="line"><a name="l00475"></a><span class="lineno">  475</span>&#160;        <span class="comment">/*Generate a number Ki in range Kmin to Kmax</span></div><div class="line"><a name="l00476"></a><span class="lineno">  476</span>&#160;<span class="comment">         */</span></div><div class="line"><a name="l00477"></a><span class="lineno">  477</span>&#160;        T_CLUSTERIDX lmmidx_krand = </div><div class="line"><a name="l00478"></a><span class="lineno">  478</span>&#160;          uniformdis_mmcidxMinMaxK(<a class="code" href="clustering__operator__centroids_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l00479"></a><span class="lineno">  479</span>&#160;       </div><div class="line"><a name="l00480"></a><span class="lineno">  480</span>&#160;        <span class="keyword">auto</span> lmapitem_kSegments = lmap_kSegments.find(lmmidx_krand);</div><div class="line"><a name="l00481"></a><span class="lineno">  481</span>&#160;        </div><div class="line"><a name="l00482"></a><span class="lineno">  482</span>&#160;        <span class="keywordflow">if</span> ( !(lmapitem_kSegments != lmap_kSegments.end()) ) {</div><div class="line"><a name="l00483"></a><span class="lineno">  483</span>&#160;</div><div class="line"><a name="l00484"></a><span class="lineno">  484</span>&#160;          <a class="code" href="classpartition_1_1_partition_disj_sets.html">partition::PartitionDisjSets&lt;T_CLUSTERIDX&gt;</a></div><div class="line"><a name="l00485"></a><span class="lineno">  485</span>&#160;            lpartitionDisjSets_clusters</div><div class="line"><a name="l00486"></a><span class="lineno">  486</span>&#160;            (<a class="code" href="namespaceclusteringop.html#a8dbc301d107623488824391c69803015">clusteringop::pointerToDisjSets</a></div><div class="line"><a name="l00487"></a><span class="lineno">  487</span>&#160;             (lvector_pairIdxLambda,</div><div class="line"><a name="l00488"></a><span class="lineno">  488</span>&#160;              larrayiu_pi,</div><div class="line"><a name="l00489"></a><span class="lineno">  489</span>&#160;              (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) lmmidx_krand </div><div class="line"><a name="l00490"></a><span class="lineno">  490</span>&#160;              )</div><div class="line"><a name="l00491"></a><span class="lineno">  491</span>&#160;             );</div><div class="line"><a name="l00492"></a><span class="lineno">  492</span>&#160;           </div><div class="line"><a name="l00493"></a><span class="lineno">  493</span>&#160;          <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_FEATURE&gt;</a>  </div><div class="line"><a name="l00494"></a><span class="lineno">  494</span>&#160;            lmatrixrowt_newMinMaxKSegments = </div><div class="line"><a name="l00495"></a><span class="lineno">  495</span>&#160;            <a class="code" href="namespaceeac.html#acbb856419d6ad4b563a5dff8119787f6">tgca_getKSegments</a></div><div class="line"><a name="l00496"></a><span class="lineno">  496</span>&#160;            (aiiterator_instfirst,</div><div class="line"><a name="l00497"></a><span class="lineno">  497</span>&#160;             aiiterator_instlast,</div><div class="line"><a name="l00498"></a><span class="lineno">  498</span>&#160;             lpartitionDisjSets_clusters,</div><div class="line"><a name="l00499"></a><span class="lineno">  499</span>&#160;             [&amp;](<span class="keyword">const</span> <a class="code" href="classdata_1_1_instance.html">data::Instance&lt;T_FEATURE&gt;</a>* aiinst_iter)</div><div class="line"><a name="l00500"></a><span class="lineno">  500</span>&#160;             {</div><div class="line"><a name="l00501"></a><span class="lineno">  501</span>&#160;               <span class="keywordflow">return</span> aiinst_iter-&gt;<a class="code" href="classdata_1_1_instance.html#a922f0985a9b7d465b340831dcd540d83">getAttribute</a>(lui_idxAttMaxRange);</div><div class="line"><a name="l00502"></a><span class="lineno">  502</span>&#160;             }</div><div class="line"><a name="l00503"></a><span class="lineno">  503</span>&#160;             );</div><div class="line"><a name="l00504"></a><span class="lineno">  504</span>&#160;          </div><div class="line"><a name="l00505"></a><span class="lineno">  505</span>&#160;          lmap_kSegments.emplace(lmmidx_krand,lmatrixrowt_newMinMaxKSegments);</div><div class="line"><a name="l00506"></a><span class="lineno">  506</span>&#160;</div><div class="line"><a name="l00507"></a><span class="lineno">  507</span>&#160;          lmapitem_kSegments = lmap_kSegments.find(lmmidx_krand);         </div><div class="line"><a name="l00508"></a><span class="lineno">  508</span>&#160;        }</div><div class="line"><a name="l00509"></a><span class="lineno">  509</span>&#160;        <a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;</a> *lchrom_new=</div><div class="line"><a name="l00510"></a><span class="lineno">  510</span>&#160;          <a class="code" href="namespacegaclusteringop.html#a182c10ea30b952abe8b98ae7e83f6938">gaclusteringop::newChromosome</a></div><div class="line"><a name="l00511"></a><span class="lineno">  511</span>&#160;          ((*lmapitem_kSegments).second,</div><div class="line"><a name="l00512"></a><span class="lineno">  512</span>&#160;           <a class="code" href="unsupervised__measures_8hpp.html#aed2d7fec3655cf98554603a6b34bbd96">measuare_undefVRC</a>(T_METRIC),</div><div class="line"><a name="l00513"></a><span class="lineno">  513</span>&#160;           <a class="code" href="unsupervised__measures_8hpp.html#aed2d7fec3655cf98554603a6b34bbd96">measuare_undefVRC</a>(T_METRIC)</div><div class="line"><a name="l00514"></a><span class="lineno">  514</span>&#160;           );</div><div class="line"><a name="l00515"></a><span class="lineno">  515</span>&#160;        lvectorchrom_population.push_back( lchrom_new );</div><div class="line"><a name="l00516"></a><span class="lineno">  516</span>&#160;      }</div><div class="line"><a name="l00517"></a><span class="lineno">  517</span>&#160;</div><div class="line"><a name="l00518"></a><span class="lineno">  518</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__INITIALIZATION RANDOM SAMPLING__*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00519"></a><span class="lineno">  519</span>&#160;    </div><div class="line"><a name="l00520"></a><span class="lineno">  520</span>&#160;</div><div class="line"><a name="l00521"></a><span class="lineno">  521</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00522"></a><span class="lineno">  522</span>&#160;    <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00523"></a><span class="lineno">  523</span>&#160;      std::cout &lt;&lt; geverbosepc_labelstep</div><div class="line"><a name="l00524"></a><span class="lineno">  524</span>&#160;                &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l00525"></a><span class="lineno">  525</span>&#160;                &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;population_size = &quot;</span> &lt;&lt; lvectorchrom_population.size();</div><div class="line"><a name="l00526"></a><span class="lineno">  526</span>&#160;      std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l00527"></a><span class="lineno">  527</span>&#160;    }</div><div class="line"><a name="l00528"></a><span class="lineno">  528</span>&#160;    --geiinparam_verbose;</div><div class="line"><a name="l00529"></a><span class="lineno">  529</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00530"></a><span class="lineno">  530</span>&#160;</div><div class="line"><a name="l00531"></a><span class="lineno">  531</span>&#160; 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(3);</span></div><div class="line"><a name="l00541"></a><span class="lineno">  541</span>&#160;<span class="comment">    */</span></div><div class="line"><a name="l00542"></a><span class="lineno">  542</span>&#160;</div><div class="line"><a name="l00543"></a><span class="lineno">  543</span>&#160;    {<span class="comment">/*BEGIN EVALUATION OF INDIVIDUALS*/</span></div><div class="line"><a name="l00544"></a><span class="lineno">  544</span>&#160;      </div><div class="line"><a name="l00545"></a><span class="lineno">  545</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00546"></a><span class="lineno">  546</span>&#160;      <span class="comment">/*ID PROC</span></div><div class="line"><a name="l00547"></a><span class="lineno">  547</span>&#160;<span class="comment">       */</span></div><div class="line"><a name="l00548"></a><span class="lineno">  548</span>&#160;      ++geverboseui_idproc;</div><div class="line"><a name="l00549"></a><span class="lineno">  549</span>&#160;      geverbosepc_labelstep = <span class="stringliteral">&quot;2. EVALUATION OF INDIVIDUALS&quot;</span>;</div><div class="line"><a name="l00550"></a><span class="lineno">  550</span>&#160;      ++geiinparam_verbose;</div><div class="line"><a name="l00551"></a><span class="lineno">  551</span>&#160;      <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00552"></a><span class="lineno">  552</span>&#160;        std::cout &lt;&lt; geverbosepc_labelstep</div><div class="line"><a name="l00553"></a><span class="lineno">  553</span>&#160;                  &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l00554"></a><span class="lineno">  554</span>&#160;                  &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;population_size = &quot;</span> &lt;&lt; lvectorchrom_population.size()</div><div class="line"><a name="l00555"></a><span class="lineno">  555</span>&#160;                  &lt;&lt; std::endl;</div><div class="line"><a name="l00556"></a><span class="lineno">  556</span>&#160;      }</div><div class="line"><a name="l00557"></a><span class="lineno">  557</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00558"></a><span class="lineno">  558</span>&#160;</div><div class="line"><a name="l00559"></a><span class="lineno">  559</span>&#160;</div><div class="line"><a name="l00560"></a><span class="lineno">  560</span>&#160;<span class="preprocessor">#ifdef __DELETE_EMPTY_CLUSTER__</span></div><div class="line"><a name="l00561"></a><span class="lineno">  561</span>&#160;</div><div class="line"><a name="l00562"></a><span class="lineno">  562</span>&#160;      std::vector&lt;gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;* &gt;  </div><div class="line"><a name="l00563"></a><span class="lineno">  563</span>&#160;        lvectorchrom_tmpPopulation;</div><div class="line"><a name="l00564"></a><span class="lineno">  564</span>&#160;</div><div class="line"><a name="l00565"></a><span class="lineno">  565</span>&#160; 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         std::vector&lt;T_CLUSTERIDX&gt; lvectormcidx_memberShip</div><div class="line"><a name="l00589"></a><span class="lineno">  589</span>&#160;            (lui_numInstances,</div><div class="line"><a name="l00590"></a><span class="lineno">  590</span>&#160;             T_CLUSTERIDX(<a class="code" href="nearestinstance__operator_8hpp.html#ac6dfec13abcffd9b8f8abd4ad0cf6f11">NEARESTCENTROID_UNKNOWN</a>)</div><div class="line"><a name="l00591"></a><span class="lineno">  591</span>&#160;             );</div><div class="line"><a name="l00592"></a><span class="lineno">  592</span>&#160;</div><div class="line"><a name="l00593"></a><span class="lineno">  593</span>&#160;          <a class="code" href="classpartition_1_1_partition_label_vector.html">partition::PartitionLabelVector&lt;T_CLUSTERIDX&gt;</a></div><div class="line"><a name="l00594"></a><span class="lineno">  594</span>&#160;            lpartitionLabelVector_clusters</div><div class="line"><a name="l00595"></a><span class="lineno">  595</span>&#160;            (lvectormcidx_memberShip,</div><div class="line"><a name="l00596"></a><span class="lineno">  596</span>&#160;             (T_CLUSTERIDX) lui_numClusterK </div><div class="line"><a name="l00597"></a><span class="lineno">  597</span>&#160;             );</div><div class="line"><a name="l00598"></a><span class="lineno">  598</span>&#160;               </div><div class="line"><a name="l00599"></a><span class="lineno">  599</span>&#160;          <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>       luintidx_numThreshold;</div><div class="line"><a name="l00600"></a><span class="lineno">  600</span>&#160;</div><div class="line"><a name="l00601"></a><span class="lineno">  601</span>&#160;          <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_FEATURE_SUM&gt;</a>       </div><div class="line"><a name="l00602"></a><span class="lineno">  602</span>&#160;            lmatrixrowt_sumInstCluster</div><div class="line"><a name="l00603"></a><span class="lineno">  603</span>&#160;            (lui_numClusterK,</div><div class="line"><a name="l00604"></a><span class="lineno">  604</span>&#160;             <a class="code" href="classdata_1_1_instance.html">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>(),</div><div class="line"><a name="l00605"></a><span class="lineno">  605</span>&#160;             T_FEATURE_SUM(0)</div><div class="line"><a name="l00606"></a><span class="lineno">  606</span>&#160;             );</div><div class="line"><a name="l00607"></a><span class="lineno">  607</span>&#160;        </div><div class="line"><a name="l00608"></a><span class="lineno">  608</span>&#160;          std::vector&lt;T_INSTANCES_CLUSTER_K&gt; </div><div class="line"><a name="l00609"></a><span class="lineno">  609</span>&#160;            lvectort_numInstClusterK</div><div class="line"><a name="l00610"></a><span class="lineno">  610</span>&#160;            (lui_numClusterK,</div><div class="line"><a name="l00611"></a><span class="lineno">  611</span>&#160;             T_INSTANCES_CLUSTER_K(0)</div><div class="line"><a name="l00612"></a><span class="lineno">  612</span>&#160;             );</div><div class="line"><a name="l00613"></a><span class="lineno">  613</span>&#160;</div><div class="line"><a name="l00614"></a><span class="lineno">  614</span>&#160;          <a class="code" href="common_8hpp.html#a734ee339b276e05610799bc83e7f4c94">COMMON_IDOMAIN</a>  lit_numMaxIter = 0;</div><div class="line"><a name="l00615"></a><span class="lineno">  615</span>&#160;</div><div class="line"><a name="l00616"></a><span class="lineno">  616</span>&#160;          <span class="keywordflow">do</span> {</div><div class="line"><a name="l00617"></a><span class="lineno">  617</span>&#160;                 </div><div class="line"><a name="l00618"></a><span class="lineno">  618</span>&#160;            <span class="comment">/*STEP ASSIGNMENT</span></div><div class="line"><a name="l00619"></a><span class="lineno">  619</span>&#160;<span class="comment">             */</span></div><div class="line"><a name="l00620"></a><span class="lineno">  620</span>&#160;            luintidx_numThreshold = </div><div class="line"><a name="l00621"></a><span class="lineno">  621</span>&#160;              <a class="code" href="namespaceclusteringop.html#ad5da564b9274992e7f64e53f3c9d14b3">clusteringop::reassignCluster</a> </div><div class="line"><a name="l00622"></a><span class="lineno">  622</span>&#160;              (lvectormcidx_memberShip.data(),</div><div class="line"><a name="l00623"></a><span class="lineno">  623</span>&#160;               lmatrixrowt_centroidsChrom,</div><div class="line"><a name="l00624"></a><span class="lineno">  624</span>&#160;               aiiterator_instfirst,</div><div class="line"><a name="l00625"></a><span class="lineno">  625</span>&#160;               aiiterator_instlast,</div><div class="line"><a name="l00626"></a><span class="lineno">  626</span>&#160;               aifunc2p_dist</div><div class="line"><a name="l00627"></a><span class="lineno">  627</span>&#160;               );</div><div class="line"><a name="l00628"></a><span class="lineno">  628</span>&#160;</div><div class="line"><a name="l00629"></a><span class="lineno">  629</span>&#160;            </div><div class="line"><a name="l00630"></a><span class="lineno">  630</span>&#160;            <span class="comment">/*STEP UPDATE</span></div><div class="line"><a name="l00631"></a><span class="lineno">  631</span>&#160;<span class="comment">             */</span></div><div class="line"><a name="l00632"></a><span class="lineno">  632</span>&#160;              <a class="code" href="namespaceclusteringop.html#ac52fbdbee047ca93bef1426d6493f31f">clusteringop::getCentroids</a></div><div class="line"><a name="l00633"></a><span class="lineno">  633</span>&#160;              (lmatrixrowt_centroidsChrom,</div><div class="line"><a name="l00634"></a><span class="lineno">  634</span>&#160;               lmatrixrowt_sumInstCluster,</div><div class="line"><a name="l00635"></a><span class="lineno">  635</span>&#160;               lvectort_numInstClusterK,</div><div class="line"><a name="l00636"></a><span class="lineno">  636</span>&#160;               lpartitionLabelVector_clusters,</div><div class="line"><a name="l00637"></a><span class="lineno">  637</span>&#160;               aiiterator_instfirst,</div><div class="line"><a name="l00638"></a><span class="lineno">  638</span>&#160;               aiiterator_instlast</div><div class="line"><a name="l00639"></a><span class="lineno">  639</span>&#160;               );</div><div class="line"><a name="l00640"></a><span class="lineno">  640</span>&#160;       </div><div class="line"><a name="l00641"></a><span class="lineno">  641</span>&#160;            ++lit_numMaxIter;</div><div class="line"><a name="l00642"></a><span class="lineno">  642</span>&#160;                           </div><div class="line"><a name="l00643"></a><span class="lineno">  643</span>&#160;          } <span class="keywordflow">while</span></div><div class="line"><a name="l00644"></a><span class="lineno">  644</span>&#160;              ((luintidx_numThreshold &gt; aiinp_inParamTGCA.getKmeansMinThreshold()) &amp;&amp;</div><div class="line"><a name="l00645"></a><span class="lineno">  645</span>&#160;               ( lit_numMaxIter  &lt;  aiinp_inParamTGCA.getKmeansNumMaxIter() )</div><div class="line"><a name="l00646"></a><span class="lineno">  646</span>&#160;               );</div><div class="line"><a name="l00647"></a><span class="lineno">  647</span>&#160;</div><div class="line"><a name="l00648"></a><span class="lineno">  648</span>&#160;<span class="preprocessor">#ifdef __DELETE_EMPTY_CLUSTER__</span></div><div class="line"><a name="l00649"></a><span class="lineno">  649</span>&#160;</div><div class="line"><a name="l00650"></a><span class="lineno">  650</span>&#160;          <span class="keywordflow">if</span> ( lmcidx_numClusterNull &gt; 0 ) {</div><div class="line"><a name="l00651"></a><span class="lineno">  651</span>&#160;            </div><div class="line"><a name="l00652"></a><span class="lineno">  652</span>&#160;            <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lui_numClusterKWithoutNull =</div><div class="line"><a name="l00653"></a><span class="lineno">  653</span>&#160;              lui_numClusterK - (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) lmcidx_numClusterNull;</div><div class="line"><a name="l00654"></a><span class="lineno">  654</span>&#160;            </div><div class="line"><a name="l00655"></a><span class="lineno">  655</span>&#160;            <a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;</a> *lchrom_withoutNull =</div><div class="line"><a name="l00656"></a><span class="lineno">  656</span>&#160;              <span class="keyword">new</span> <a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;</a></div><div class="line"><a name="l00657"></a><span class="lineno">  657</span>&#160;              ( lui_numClusterKWithoutNull * <a class="code" href="classdata_1_1_instance.html">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>());</div><div class="line"><a name="l00658"></a><span class="lineno">  658</span>&#160;            </div><div class="line"><a name="l00659"></a><span class="lineno">  659</span>&#160;            <span class="comment">/*DECODE CHROMOSOME*/</span></div><div class="line"><a name="l00660"></a><span class="lineno">  660</span>&#160;            <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_FEATURE&gt;</a> </div><div class="line"><a name="l00661"></a><span class="lineno">  661</span>&#160;              lmatrixrowt_centroidsChromWithoutNull</div><div class="line"><a name="l00662"></a><span class="lineno">  662</span>&#160;              ( lui_numClusterKWithoutNull, </div><div class="line"><a name="l00663"></a><span class="lineno">  663</span>&#160;                <a class="code" href="classdata_1_1_instance.html">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>(),</div><div class="line"><a name="l00664"></a><span class="lineno">  664</span>&#160;                lchrom_withoutNull-&gt;getString()</div><div class="line"><a name="l00665"></a><span class="lineno">  665</span>&#160;                );</div><div class="line"><a name="l00666"></a><span class="lineno">  666</span>&#160;  </div><div class="line"><a name="l00667"></a><span class="lineno">  667</span>&#160;            <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> _lui_iRowWithoutNull = 0;</div><div class="line"><a name="l00668"></a><span class="lineno">  668</span>&#160;            <span class="keywordflow">for</span> (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> _lui_iRow = 0;</div><div class="line"><a name="l00669"></a><span class="lineno">  669</span>&#160;                 _lui_iRow  &lt; lmatrixrowt_centroidsChrom.getNumRows();</div><div class="line"><a name="l00670"></a><span class="lineno">  670</span>&#160;                 ++_lui_iRow)</div><div class="line"><a name="l00671"></a><span class="lineno">  671</span>&#160;              {</div><div class="line"><a name="l00672"></a><span class="lineno">  672</span>&#160;                <span class="keywordflow">if</span> ( lvectort_numInstClusterK.at(_lui_iRow) != 0 ) {</div><div class="line"><a name="l00673"></a><span class="lineno">  673</span>&#160; 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            T_CLUSTERIDX(lmatrixrowt_centroidsChrom.getNumRows()),</div><div class="line"><a name="l00732"></a><span class="lineno">  732</span>&#160;             aifunc2p_dist</div><div class="line"><a name="l00733"></a><span class="lineno">  733</span>&#160;             );</div><div class="line"><a name="l00734"></a><span class="lineno">  734</span>&#160;          </div><div class="line"><a name="l00735"></a><span class="lineno">  735</span>&#160;          T_METRIC lT_VRC;</div><div class="line"><a name="l00736"></a><span class="lineno">  736</span>&#160;           </div><div class="line"><a name="l00737"></a><span class="lineno">  737</span>&#160;          lT_VRC =</div><div class="line"><a name="l00738"></a><span class="lineno">  738</span>&#160;            <a class="code" href="namespaceum.html#a02c5655fb5595af79e18a1462114be29">um::VRC</a></div><div class="line"><a name="l00739"></a><span class="lineno">  739</span>&#160;            (lmatrixrowt_centroidsChrom,</div><div class="line"><a name="l00740"></a><span class="lineno">  740</span>&#160;             aiiterator_instfirst,</div><div class="line"><a name="l00741"></a><span class="lineno">  741</span>&#160;             aiiterator_instlast,</div><div class="line"><a name="l00742"></a><span class="lineno">  742</span>&#160;             lpartition_clusters,</div><div class="line"><a name="l00743"></a><span class="lineno">  743</span>&#160;             aifunc2p_dist</div><div class="line"><a name="l00744"></a><span class="lineno">  744</span>&#160;             );</div><div class="line"><a name="l00745"></a><span class="lineno">  745</span>&#160;</div><div class="line"><a name="l00746"></a><span class="lineno">  746</span>&#160;          <span class="keywordflow">if</span> (lT_VRC != <a class="code" href="unsupervised__measures_8hpp.html#aed2d7fec3655cf98554603a6b34bbd96">measuare_undefVRC</a>(T_METRIC) ) {</div><div class="line"><a name="l00747"></a><span class="lineno">  747</span>&#160;            lchrom_iter-&gt;setValidString(<span class="keyword">true</span>);</div><div class="line"><a name="l00748"></a><span class="lineno">  748</span>&#160;          }</div><div class="line"><a name="l00749"></a><span class="lineno">  749</span>&#160;          <span class="keywordflow">else</span> {</div><div class="line"><a name="l00750"></a><span class="lineno">  750</span>&#160;            lchrom_iter-&gt;setValidString(<span class="keyword">false</span>);</div><div class="line"><a name="l00751"></a><span class="lineno">  751</span>&#160;            aoop_outParamGAC.incTotalInvalidOffspring();</div><div class="line"><a name="l00752"></a><span class="lineno">  752</span>&#160;          }</div><div class="line"><a name="l00753"></a><span class="lineno">  753</span>&#160;           </div><div class="line"><a name="l00754"></a><span class="lineno">  754</span>&#160;          lchrom_iter-&gt;setObjetiveFunc(lT_VRC); </div><div class="line"><a name="l00755"></a><span class="lineno">  755</span>&#160;          lchrom_iter-&gt;setFitness(lT_VRC);</div><div class="line"><a name="l00756"></a><span class="lineno">  756</span>&#160;            </div><div class="line"><a name="l00757"></a><span class="lineno">  757</span>&#160;        }</div><div class="line"><a name="l00758"></a><span class="lineno">  758</span>&#160;        <span class="keywordflow">else</span> {</div><div class="line"><a name="l00759"></a><span class="lineno">  759</span>&#160;          lchrom_iter-&gt;setValidString(<span class="keyword">false</span>);</div><div class="line"><a name="l00760"></a><span class="lineno">  760</span>&#160;          aoop_outParamGAC.incTotalInvalidOffspring();</div><div class="line"><a name="l00761"></a><span class="lineno">  761</span>&#160;          lchrom_iter-&gt;setObjetiveFunc(<a class="code" href="unsupervised__measures_8hpp.html#aed2d7fec3655cf98554603a6b34bbd96">measuare_undefVRC</a>(T_METRIC));</div><div class="line"><a name="l00762"></a><span class="lineno">  762</span>&#160;          lchrom_iter-&gt;setFitness(<a class="code" href="unsupervised__measures_8hpp.html#aed2d7fec3655cf98554603a6b34bbd96">measuare_undefVRC</a>(T_METRIC));</div><div class="line"><a name="l00763"></a><span class="lineno">  763</span>&#160;        }</div><div class="line"><a name="l00764"></a><span class="lineno">  764</span>&#160;             </div><div class="line"><a name="l00765"></a><span class="lineno">  765</span>&#160;<span class="preprocessor">#ifndef __WITHOUT_PLOT_STAT</span></div><div class="line"><a name="l00766"></a><span class="lineno">  766</span>&#160;        lvectort_statfuncObjetiveFunc.push_back(lchrom_iter-&gt;getObjetiveFunc());</div><div class="line"><a name="l00767"></a><span class="lineno">  767</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__WITHOUT_PLOT_STAT*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00768"></a><span class="lineno">  768</span>&#160;      }</div><div class="line"><a name="l00769"></a><span class="lineno">  769</span>&#160;</div><div class="line"><a name="l00770"></a><span class="lineno">  770</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00771"></a><span class="lineno">  771</span>&#160;      <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00772"></a><span class="lineno">  772</span>&#160;        std::cout &lt;&lt; geverbosepc_labelstep</div><div class="line"><a name="l00773"></a><span class="lineno">  773</span>&#160;                  &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span>;</div><div class="line"><a name="l00774"></a><span class="lineno">  774</span>&#160;        <a class="code" href="namespaceinout.html#a0c10a45877a347dec0d4ec4e5b05b828">inout::containerprint</a></div><div class="line"><a name="l00775"></a><span class="lineno">  775</span>&#160;          (lvectorchrom_population.begin(),</div><div class="line"><a name="l00776"></a><span class="lineno">  776</span>&#160;           lvectorchrom_population.end(),</div><div class="line"><a name="l00777"></a><span class="lineno">  777</span>&#160;           [](<span class="keyword">const</span> <a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;</a>* lchrom_iter) -&gt; std::string</div><div class="line"><a name="l00778"></a><span class="lineno">  778</span>&#160;           {</div><div class="line"><a name="l00779"></a><span class="lineno">  779</span>&#160;             std::ostringstream lostrstream_label;</div><div class="line"><a name="l00780"></a><span class="lineno">  780</span>&#160;             <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lui_chromiterK =   lchrom_iter-&gt;getStringSize()</div><div class="line"><a name="l00781"></a><span class="lineno">  781</span>&#160;               / <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>();</div><div class="line"><a name="l00782"></a><span class="lineno">  782</span>&#160;</div><div class="line"><a name="l00783"></a><span class="lineno">  783</span>&#160;             lostrstream_label &lt;&lt; lchrom_iter-&gt;getObjetiveFunc() &lt;&lt; <span class="charliteral">&#39; &#39;</span> &lt;&lt; lui_chromiterK;</div><div class="line"><a name="l00784"></a><span class="lineno">  784</span>&#160;             <span class="keywordflow">return</span> lostrstream_label.str();</div><div class="line"><a name="l00785"></a><span class="lineno">  785</span>&#160;           },</div><div class="line"><a name="l00786"></a><span class="lineno">  786</span>&#160;           std::cout,</div><div class="line"><a name="l00787"></a><span class="lineno">  787</span>&#160;           <span class="stringliteral">&quot;&lt;POPULATIONOBJETIVEFUNC&quot;</span>,</div><div class="line"><a name="l00788"></a><span class="lineno">  788</span>&#160;           <span class="charliteral">&#39;,&#39;</span></div><div class="line"><a name="l00789"></a><span class="lineno">  789</span>&#160;           );</div><div class="line"><a name="l00790"></a><span class="lineno">  790</span>&#160;        std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l00791"></a><span class="lineno">  791</span>&#160;      }</div><div class="line"><a name="l00792"></a><span class="lineno">  792</span>&#160;      --geiinparam_verbose;</div><div class="line"><a name="l00793"></a><span class="lineno">  793</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00794"></a><span class="lineno">  794</span>&#160;</div><div class="line"><a name="l00795"></a><span class="lineno">  795</span>&#160;    } <span class="comment">/*END EVALUATION OF INDIVIDUALS</span></div><div class="line"><a name="l00796"></a><span class="lineno">  796</span>&#160;<span class="comment">       */</span></div><div class="line"><a name="l00797"></a><span class="lineno">  797</span>&#160;</div><div class="line"><a name="l00798"></a><span class="lineno">  798</span>&#160;    <span class="comment">/*c) Keep the best individuals to the next generation for con-</span></div><div class="line"><a name="l00799"></a><span class="lineno">  799</span>&#160;<span class="comment">      tinuous evolution.</span></div><div class="line"><a name="l00800"></a><span class="lineno">  800</span>&#160;<span class="comment">    */</span></div><div class="line"><a name="l00801"></a><span class="lineno">  801</span>&#160;    { <span class="comment">/*BEGIN PRESERVING THE BEST STRING*/</span></div><div class="line"><a name="l00802"></a><span class="lineno">  802</span>&#160;</div><div class="line"><a name="l00803"></a><span class="lineno">  803</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00804"></a><span class="lineno">  804</span>&#160;      geverbosepc_labelstep = <span class="stringliteral">&quot;ELITISM PRESERVING THE BEST&quot;</span>;</div><div class="line"><a name="l00805"></a><span class="lineno">  805</span>&#160;      ++geiinparam_verbose;</div><div class="line"><a name="l00806"></a><span class="lineno">  806</span>&#160;      <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00807"></a><span class="lineno">  807</span>&#160;        std::cout &lt;&lt; geverbosepc_labelstep</div><div class="line"><a name="l00808"></a><span class="lineno">  808</span>&#160;                  &lt;&lt; <span class="stringliteral">&quot;: IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l00809"></a><span class="lineno">  809</span>&#160;                  &lt;&lt; std::endl;</div><div class="line"><a name="l00810"></a><span class="lineno">  810</span>&#160;      }</div><div class="line"><a name="l00811"></a><span class="lineno">  811</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00812"></a><span class="lineno">  812</span>&#160;</div><div class="line"><a name="l00813"></a><span class="lineno">  813</span>&#160;      <span class="keyword">const</span> <span class="keyword">auto</span> lit_chromMax =</div><div class="line"><a name="l00814"></a><span class="lineno">  814</span>&#160;        *(std::max_element</div><div class="line"><a name="l00815"></a><span class="lineno">  815</span>&#160;          (lvectorchrom_population.begin(), </div><div class="line"><a name="l00816"></a><span class="lineno">  816</span>&#160;           lvectorchrom_population.end(), </div><div class="line"><a name="l00817"></a><span class="lineno">  817</span>&#160;           [](<span class="keyword">const</span> <a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;</a>* x, </div><div class="line"><a name="l00818"></a><span class="lineno">  818</span>&#160;              <span class="keyword">const</span> <a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;</a>* y</div><div class="line"><a name="l00819"></a><span class="lineno">  819</span>&#160;              ) </div><div class="line"><a name="l00820"></a><span class="lineno">  820</span>&#160;        {  <span class="keywordflow">return</span> x-&gt;<a class="code" href="classgaencode_1_1_chromosome_base.html#a6e201d174946aea43c98dcde4a0088f8">getFitness</a>() &lt; y-&gt;getFitness(); }</div><div class="line"><a name="l00821"></a><span class="lineno">  821</span>&#160;           )</div><div class="line"><a name="l00822"></a><span class="lineno">  822</span>&#160;          );</div><div class="line"><a name="l00823"></a><span class="lineno">  823</span>&#160;     </div><div class="line"><a name="l00824"></a><span class="lineno">  824</span>&#160;      <span class="keywordflow">if</span> ( lochrom_best.<a class="code" href="classgaencode_1_1_chromosome_base.html#a6e201d174946aea43c98dcde4a0088f8">getFitness</a>() &lt; lit_chromMax-&gt;getFitness() ) {</div><div class="line"><a name="l00825"></a><span class="lineno">  825</span>&#160;        lochrom_best = *lit_chromMax;</div><div class="line"><a name="l00826"></a><span class="lineno">  826</span>&#160;        <span class="comment">/*CHROMOSOME ONE WAS FOUND IN THIS ITERATION</span></div><div class="line"><a name="l00827"></a><span class="lineno">  827</span>&#160;<span class="comment">         */</span></div><div class="line"><a name="l00828"></a><span class="lineno">  828</span>&#160;        aoop_outParamGAC.setIterationGetsBest</div><div class="line"><a name="l00829"></a><span class="lineno">  829</span>&#160;          (llfh_listFuntionHist.getDomainUpperBound());</div><div class="line"><a name="l00830"></a><span class="lineno">  830</span>&#160;        aoop_outParamGAC.setRunTimeGetsBest</div><div class="line"><a name="l00831"></a><span class="lineno">  831</span>&#160;          (<a class="code" href="namespaceruntime.html#a088849fc5523fb2e072936513a13eb0e">runtime::elapsedTime</a>(let_executionTime));</div><div class="line"><a name="l00832"></a><span class="lineno">  832</span>&#160;</div><div class="line"><a name="l00833"></a><span class="lineno">  833</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00834"></a><span class="lineno">  834</span>&#160;        ++geiinparam_verbose;</div><div class="line"><a name="l00835"></a><span class="lineno">  835</span>&#160;        <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00836"></a><span class="lineno">  836</span>&#160;</div><div class="line"><a name="l00837"></a><span class="lineno">  837</span>&#160;          <span class="comment">/*DECODE CHROMOSOME*/</span></div><div class="line"><a name="l00838"></a><span class="lineno">  838</span>&#160;          <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_FEATURE&gt;</a> </div><div class="line"><a name="l00839"></a><span class="lineno">  839</span>&#160;            lmatrixrow_centroidsChromBest </div><div class="line"><a name="l00840"></a><span class="lineno">  840</span>&#160;            ( lochrom_best.<a class="code" href="classgaencode_1_1_chrom_variable_length.html#a4f49696aa5d8f038cb8df6ce81f40a93">getStringSize</a>() / <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>(),</div><div class="line"><a name="l00841"></a><span class="lineno">  841</span>&#160;              <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>(),</div><div class="line"><a name="l00842"></a><span class="lineno">  842</span>&#160;              lochrom_best.<a class="code" href="classgaencode_1_1_chrom_variable_length.html#ad2f7938aabc7bb8175344e36b372934d">getString</a>()</div><div class="line"><a name="l00843"></a><span class="lineno">  843</span>&#160;              );</div><div class="line"><a name="l00844"></a><span class="lineno">  844</span>&#160;</div><div class="line"><a name="l00845"></a><span class="lineno">  845</span>&#160;          std::ostringstream lostrstream_labelCentroids;</div><div class="line"><a name="l00846"></a><span class="lineno">  846</span>&#160;          lostrstream_labelCentroids</div><div class="line"><a name="l00847"></a><span class="lineno">  847</span>&#160;            &lt;&lt; <span class="stringliteral">&quot;&lt;CENTROIDSCLUSTER:&quot;</span> &lt;&lt; geverbosepc_labelstep</div><div class="line"><a name="l00848"></a><span class="lineno">  848</span>&#160;            &lt;&lt; <span class="stringliteral">&quot;:generation &quot;</span> &lt;&lt;  llfh_listFuntionHist.getDomainUpperBound()</div><div class="line"><a name="l00849"></a><span class="lineno">  849</span>&#160;            &lt;&lt; <span class="stringliteral">&quot;:lmatrixrow_centroidsChromBest[&quot;</span></div><div class="line"><a name="l00850"></a><span class="lineno">  850</span>&#160;            &lt;&lt; &amp;lmatrixrow_centroidsChromBest &lt;&lt; <span class="charliteral">&#39;]&#39;</span>;</div><div class="line"><a name="l00851"></a><span class="lineno">  851</span>&#160;          lmatrixrow_centroidsChromBest.<a class="code" href="classmat_1_1_matrix_row.html#a156313f6aa515994b76321ff03780b16">print</a></div><div class="line"><a name="l00852"></a><span class="lineno">  852</span>&#160;            (std::cout,lostrstream_labelCentroids.str().c_str(),<span class="charliteral">&#39;,&#39;</span>,<span class="charliteral">&#39;;&#39;</span>);</div><div class="line"><a name="l00853"></a><span class="lineno">  853</span>&#160;          std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l00854"></a><span class="lineno">  854</span>&#160;</div><div class="line"><a name="l00855"></a><span class="lineno">  855</span>&#160;          <span class="keyword">auto</span> lpartitionCentroids_clustersChromBest = </div><div class="line"><a name="l00856"></a><span class="lineno">  856</span>&#160;            <a class="code" href="namespacepartition.html#af77798d844adb5cb60e822da1de213e6">partition::makePartition</a></div><div class="line"><a name="l00857"></a><span class="lineno">  857</span>&#160;            (lmatrixrow_centroidsChromBest,</div><div class="line"><a name="l00858"></a><span class="lineno">  858</span>&#160;             aiiterator_instfirst,</div><div class="line"><a name="l00859"></a><span class="lineno">  859</span>&#160;             aiiterator_instlast,</div><div class="line"><a name="l00860"></a><span class="lineno">  860</span>&#160;             T_CLUSTERIDX(lmatrixrow_centroidsChromBest.getNumRows()),</div><div class="line"><a name="l00861"></a><span class="lineno">  861</span>&#160;             aifunc2p_dist</div><div class="line"><a name="l00862"></a><span class="lineno">  862</span>&#160;             );</div><div class="line"><a name="l00863"></a><span class="lineno">  863</span>&#160;        </div><div class="line"><a name="l00864"></a><span class="lineno">  864</span>&#160;          std::ostringstream lostrstream_labelShipBest;</div><div class="line"><a name="l00865"></a><span class="lineno">  865</span>&#160;          lostrstream_labelShipBest</div><div class="line"><a name="l00866"></a><span class="lineno">  866</span>&#160;            &lt;&lt; <span class="stringliteral">&quot;&lt;MEMBERCLUSTER:&quot;</span> &lt;&lt; geverbosepc_labelstep <span class="comment">//lpc_labelStep</span></div><div class="line"><a name="l00867"></a><span class="lineno">  867</span>&#160;            &lt;&lt; <span class="stringliteral">&quot;:generation &quot;</span>    &lt;&lt;  llfh_listFuntionHist.getDomainUpperBound()</div><div class="line"><a name="l00868"></a><span class="lineno">  868</span>&#160;            &lt;&lt; <span class="stringliteral">&quot;:lpartitionCentroids_clustersChromBest&lt;&gt;[&quot;</span></div><div class="line"><a name="l00869"></a><span class="lineno">  869</span>&#160;            &lt;&lt; &amp;lpartitionCentroids_clustersChromBest &lt;&lt; <span class="charliteral">&#39;]&#39;</span>;</div><div class="line"><a name="l00870"></a><span class="lineno">  870</span>&#160;          lpartitionCentroids_clustersChromBest.print</div><div class="line"><a name="l00871"></a><span class="lineno">  871</span>&#160;            (std::cout,lostrstream_labelShipBest.str().c_str(),<span class="charliteral">&#39;,&#39;</span>);</div><div class="line"><a name="l00872"></a><span class="lineno">  872</span>&#160;          </div><div class="line"><a name="l00873"></a><span class="lineno">  873</span>&#160;        }</div><div class="line"><a name="l00874"></a><span class="lineno">  874</span>&#160;        --geiinparam_verbose;</div><div class="line"><a name="l00875"></a><span class="lineno">  875</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00876"></a><span class="lineno">  876</span>&#160;        </div><div class="line"><a name="l00877"></a><span class="lineno">  877</span>&#160;      } <span class="comment">/*END IF*/</span></div><div class="line"><a name="l00878"></a><span class="lineno">  878</span>&#160;      </div><div class="line"><a name="l00879"></a><span class="lineno">  879</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00880"></a><span class="lineno">  880</span>&#160;      <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00881"></a><span class="lineno">  881</span>&#160;        std::cout &lt;&lt; geverbosepc_labelstep</div><div class="line"><a name="l00882"></a><span class="lineno">  882</span>&#160;                  &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l00883"></a><span class="lineno">  883</span>&#160;                  &lt;&lt; std::endl;</div><div class="line"><a name="l00884"></a><span class="lineno">  884</span>&#160;      }</div><div class="line"><a name="l00885"></a><span class="lineno">  885</span>&#160;      --geiinparam_verbose;</div><div class="line"><a name="l00886"></a><span class="lineno">  886</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00887"></a><span class="lineno">  887</span>&#160;</div><div class="line"><a name="l00888"></a><span class="lineno">  888</span>&#160;    } <span class="comment">/*END PRESERVING THE BEST STRING*/</span></div><div class="line"><a name="l00889"></a><span class="lineno">  889</span>&#160;</div><div class="line"><a name="l00890"></a><span class="lineno">  890</span>&#160;  </div><div class="line"><a name="l00891"></a><span class="lineno">  891</span>&#160;    <span class="comment">/*MEASUREMENT BEST: COMPUTING STATISTICAL AND METRIC OF THE ALGORITHM</span></div><div class="line"><a name="l00892"></a><span class="lineno">  892</span>&#160;<span class="comment">     */</span></div><div class="line"><a name="l00893"></a><span class="lineno">  893</span>&#160;<span class="preprocessor">#ifndef __WITHOUT_PLOT_STAT</span></div><div class="line"><a name="l00894"></a><span class="lineno">  894</span>&#160;    <span class="keywordflow">if</span> ( aiinp_inParamTGCA.getWithPlotStatObjetiveFunc() ) {  </div><div class="line"><a name="l00895"></a><span class="lineno">  895</span>&#160;      lofh_objetiveFunc-&gt;<a class="code" href="classruntime_1_1_runtime_function_value.html#ac2b3712c5f0ce97aa2c58016cc9ad986">setValue</a>(lochrom_best.<a class="code" href="classgaencode_1_1_chromosome_base.html#afc3f7dbd72d88157ba37eb8bea29478e">getObjetiveFunc</a>());</div><div class="line"><a name="l00896"></a><span class="lineno">  896</span>&#160;      <a class="code" href="namespaceruntime.html#a4b3214090bd4f8a54968b48ce58352ed">functionhiststat_evaluateAll</a></div><div class="line"><a name="l00897"></a><span class="lineno">  897</span>&#160;        (lofhs_statObjectiveFunc,</div><div class="line"><a name="l00898"></a><span class="lineno">  898</span>&#160;         lvectort_statfuncObjetiveFunc</div><div class="line"><a name="l00899"></a><span class="lineno">  899</span>&#160;         );</div><div class="line"><a name="l00900"></a><span class="lineno">  900</span>&#160;      lfileout_plotStatObjetiveFunc &lt;&lt; llfh_listFuntionHist;</div><div class="line"><a name="l00901"></a><span class="lineno">  901</span>&#160;      lvectort_statfuncObjetiveFunc.clear();</div><div class="line"><a name="l00902"></a><span class="lineno">  902</span>&#160;    }</div><div class="line"><a name="l00903"></a><span class="lineno">  903</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__WITHOUT_PLOT_STAT*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00904"></a><span class="lineno">  904</span>&#160;</div><div class="line"><a name="l00905"></a><span class="lineno">  905</span>&#160;    </div><div class="line"><a name="l00906"></a><span class="lineno">  906</span>&#160;    <span class="comment">/*3. Generation of new individuals by genetic operations</span></div><div class="line"><a name="l00907"></a><span class="lineno">  907</span>&#160;<span class="comment">      Each individual is subjected to the following conditions:</span></div><div class="line"><a name="l00908"></a><span class="lineno">  908</span>&#160;<span class="comment">    */</span></div><div class="line"><a name="l00909"></a><span class="lineno">  909</span>&#160;   </div><div class="line"><a name="l00910"></a><span class="lineno">  910</span>&#160;    { <span class="comment">/*BEGIN GENETIC OPERATIONS</span></div><div class="line"><a name="l00911"></a><span class="lineno">  911</span>&#160;<span class="comment">       */</span></div><div class="line"><a name="l00912"></a><span class="lineno">  912</span>&#160;      </div><div class="line"><a name="l00913"></a><span class="lineno">  913</span>&#160;      T_METRIC  lrt_kcon = 0.0;</div><div class="line"><a name="l00914"></a><span class="lineno">  914</span>&#160;      </div><div class="line"><a name="l00915"></a><span class="lineno">  915</span>&#160;      <span class="comment">/*CALCULATE n_sk maximum number of individuals with the </span></div><div class="line"><a name="l00916"></a><span class="lineno">  916</span>&#160;<span class="comment">        same number of clusters in the current population.</span></div><div class="line"><a name="l00917"></a><span class="lineno">  917</span>&#160;<span class="comment">      */</span></div><div class="line"><a name="l00918"></a><span class="lineno">  918</span>&#160;      </div><div class="line"><a name="l00919"></a><span class="lineno">  919</span>&#160;      { <span class="comment">/*BEGIN CALCULATE n_sk*/</span></div><div class="line"><a name="l00920"></a><span class="lineno">  920</span>&#160;        </div><div class="line"><a name="l00921"></a><span class="lineno">  921</span>&#160;        <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>        lui_nsk  = 0;</div><div class="line"><a name="l00922"></a><span class="lineno">  922</span>&#160;        </div><div class="line"><a name="l00923"></a><span class="lineno">  923</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00924"></a><span class="lineno">  924</span>&#160;        geverbosepc_labelstep = <span class="stringliteral">&quot;CALCULATE FOR SELECTION n_sk(k,NChrom)&quot;</span>;</div><div class="line"><a name="l00925"></a><span class="lineno">  925</span>&#160;        ++geiinparam_verbose;</div><div class="line"><a name="l00926"></a><span class="lineno">  926</span>&#160;        <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00927"></a><span class="lineno">  927</span>&#160;          std::cout &lt;&lt; geverbosepc_labelstep</div><div class="line"><a name="l00928"></a><span class="lineno">  928</span>&#160;                    &lt;&lt; <span class="stringliteral">&quot;: IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l00929"></a><span class="lineno">  929</span>&#160;                    &lt;&lt; std::endl;</div><div class="line"><a name="l00930"></a><span class="lineno">  930</span>&#160;        }</div><div class="line"><a name="l00931"></a><span class="lineno">  931</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l00932"></a><span class="lineno">  932</span>&#160;        </div><div class="line"><a name="l00933"></a><span class="lineno">  933</span>&#160;        std::map&lt;T_CLUSTERIDX,uintidx&gt; lmap_chromSameNumclusterK;</div><div class="line"><a name="l00934"></a><span class="lineno">  934</span>&#160;        </div><div class="line"><a name="l00935"></a><span class="lineno">  935</span>&#160;        <span class="keywordflow">for</span> (<span class="keyword">auto</span> lchrom_iter: lvectorchrom_population) {</div><div class="line"><a name="l00936"></a><span class="lineno">  936</span>&#160;          </div><div class="line"><a name="l00937"></a><span class="lineno">  937</span>&#160;          T_CLUSTERIDX lmmidx_numClusterK =</div><div class="line"><a name="l00938"></a><span class="lineno">  938</span>&#160;            T_CLUSTERIDX</div><div class="line"><a name="l00939"></a><span class="lineno">  939</span>&#160;            (lchrom_iter-&gt;getStringSize() / <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>()</div><div class="line"><a name="l00940"></a><span class="lineno">  940</span>&#160;             );      </div><div class="line"><a name="l00941"></a><span class="lineno">  941</span>&#160;             </div><div class="line"><a name="l00942"></a><span class="lineno">  942</span>&#160;          <span class="keyword">auto</span>  litermap_numSamesClusterK = </div><div class="line"><a name="l00943"></a><span class="lineno">  943</span>&#160;            lmap_chromSameNumclusterK.find(lmmidx_numClusterK);</div><div class="line"><a name="l00944"></a><span class="lineno">  944</span>&#160;          <span class="keywordflow">if</span>  ( litermap_numSamesClusterK != lmap_chromSameNumclusterK.end() ) {</div><div class="line"><a name="l00945"></a><span class="lineno">  945</span>&#160;            litermap_numSamesClusterK-&gt;second++;</div><div class="line"><a name="l00946"></a><span class="lineno">  946</span>&#160;          }</div><div class="line"><a name="l00947"></a><span class="lineno">  947</span>&#160;          <span class="keywordflow">else</span> { <span class="comment">//NEW NUM CLUSTERK</span></div><div class="line"><a name="l00948"></a><span class="lineno">  948</span>&#160;            lmap_chromSameNumclusterK.insert</div><div class="line"><a name="l00949"></a><span class="lineno">  949</span>&#160;              (std::pair&lt;T_CLUSTERIDX,uintidx&gt;(lmmidx_numClusterK,<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>(1)));</div><div class="line"><a name="l00950"></a><span class="lineno">  950</span>&#160;          }</div><div class="line"><a name="l00951"></a><span class="lineno">  951</span>&#160;        }</div><div class="line"><a name="l00952"></a><span class="lineno">  952</span>&#160;</div><div class="line"><a name="l00953"></a><span class="lineno">  953</span>&#160;        <span class="keyword">auto</span> litermap_max = std::max_element</div><div class="line"><a name="l00954"></a><span class="lineno">  954</span>&#160;          (</div><div class="line"><a name="l00955"></a><span class="lineno">  955</span>&#160;           std::begin(lmap_chromSameNumclusterK),</div><div class="line"><a name="l00956"></a><span class="lineno">  956</span>&#160;           std::end(lmap_chromSameNumclusterK),</div><div class="line"><a name="l00957"></a><span class="lineno">  957</span>&#160;           [] (<span class="keyword">const</span> std::pair&lt;T_CLUSTERIDX,uintidx&gt; &amp;litermap_it1,</div><div class="line"><a name="l00958"></a><span class="lineno">  958</span>&#160;               <span class="keyword">const</span> std::pair&lt;T_CLUSTERIDX,uintidx&gt; &amp;litermap_it2)</div><div class="line"><a name="l00959"></a><span class="lineno">  959</span>&#160;           {</div><div class="line"><a name="l00960"></a><span class="lineno">  960</span>&#160;             <span class="keywordflow">return</span> litermap_it1.second &lt; litermap_it2.second;</div><div class="line"><a name="l00961"></a><span class="lineno">  961</span>&#160;           }</div><div class="line"><a name="l00962"></a><span class="lineno">  962</span>&#160;           );</div><div class="line"><a name="l00963"></a><span class="lineno">  963</span>&#160;        </div><div class="line"><a name="l00964"></a><span class="lineno">  964</span>&#160;        lui_nsk = litermap_max-&gt;second;</div><div class="line"><a name="l00965"></a><span class="lineno">  965</span>&#160;        lrt_kcon =</div><div class="line"><a name="l00966"></a><span class="lineno">  966</span>&#160;          (T_METRIC) lui_nsk / (T_METRIC) lvectorchrom_population.size();</div><div class="line"><a name="l00967"></a><span class="lineno">  967</span>&#160;</div><div class="line"><a name="l00968"></a><span class="lineno">  968</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l00969"></a><span class="lineno">  969</span>&#160;        <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l00970"></a><span class="lineno">  970</span>&#160;          std::cout &lt;&lt; geverbosepc_labelstep</div><div class="line"><a name="l00971"></a><span class="lineno">  971</span>&#160;                    &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l00972"></a><span class="lineno">  972</span>&#160;                    &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;lui_nsk = &quot;</span>  &lt;&lt; lui_nsk</div><div class="line"><a name="l00973"></a><span class="lineno">  973</span>&#160;                    &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;lrt_kcon = &quot;</span> &lt;&lt; lrt_kcon</div><div class="line"><a name="l00974"></a><span class="lineno">  974</span>&#160;                    &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;lrt_alpha = &quot;</span> &lt;&lt; std::exp(-lrt_kcon)</div><div class="line"><a name="l00975"></a><span class="lineno">  975</span>&#160;                    &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;Kmode = &quot;</span> &lt;&lt; litermap_max-&gt;first</div><div class="line"><a name="l00976"></a><span class="lineno">  976</span>&#160;                    &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l00977"></a><span class="lineno">  977</span>&#160;</div><div class="line"><a name="l00978"></a><span class="lineno">  978</span>&#160;          <a class="code" href="namespaceinout.html#a0c10a45877a347dec0d4ec4e5b05b828">inout::containerprint</a></div><div class="line"><a name="l00979"></a><span class="lineno">  979</span>&#160;            (lmap_chromSameNumclusterK.begin(),</div><div class="line"><a name="l00980"></a><span class="lineno">  980</span>&#160;             lmap_chromSameNumclusterK.end(),</div><div class="line"><a name="l00981"></a><span class="lineno">  981</span>&#160;             [](<span class="keyword">const</span> std::pair&lt;T_CLUSTERIDX,uintidx&gt;&amp; lpairmap_sameNumclusterK)</div><div class="line"><a name="l00982"></a><span class="lineno">  982</span>&#160;             -&gt; std::string</div><div class="line"><a name="l00983"></a><span class="lineno">  983</span>&#160;             {</div><div class="line"><a name="l00984"></a><span class="lineno">  984</span>&#160;               std::ostringstream lostrstream_label;</div><div class="line"><a name="l00985"></a><span class="lineno">  985</span>&#160;               lostrstream_label</div><div class="line"><a name="l00986"></a><span class="lineno">  986</span>&#160;                 &lt;&lt;  lpairmap_sameNumclusterK.first</div><div class="line"><a name="l00987"></a><span class="lineno">  987</span>&#160;                 &lt;&lt; <span class="stringliteral">&quot;,&quot;</span></div><div class="line"><a name="l00988"></a><span class="lineno">  988</span>&#160;                 &lt;&lt; lpairmap_sameNumclusterK.second;</div><div class="line"><a name="l00989"></a><span class="lineno">  989</span>&#160;               </div><div class="line"><a name="l00990"></a><span class="lineno">  990</span>&#160;               <span class="keywordflow">return</span> lostrstream_label.str();</div><div class="line"><a name="l00991"></a><span class="lineno">  991</span>&#160;             },</div><div class="line"><a name="l00992"></a><span class="lineno">  992</span>&#160;             std::cout,</div><div class="line"><a name="l00993"></a><span class="lineno">  993</span>&#160;             <span class="stringliteral">&quot;&lt;CHROMOSEMESAMENUMCLUSTERK&quot;</span>,</div><div class="line"><a name="l00994"></a><span class="lineno">  994</span>&#160;             <span class="charliteral">&#39;;&#39;</span></div><div class="line"><a name="l00995"></a><span class="lineno">  995</span>&#160;             );</div><div class="line"><a name="l00996"></a><span class="lineno">  996</span>&#160;          std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l00997"></a><span class="lineno">  997</span>&#160;          </div><div class="line"><a name="l00998"></a><span class="lineno">  998</span>&#160;        }</div><div class="line"><a name="l00999"></a><span class="lineno">  999</span>&#160;        --geiinparam_verbose;</div><div class="line"><a name="l01000"></a><span class="lineno"> 1000</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01001"></a><span class="lineno"> 1001</span>&#160;              </div><div class="line"><a name="l01002"></a><span class="lineno"> 1002</span>&#160;      } <span class="comment">/*END CALCULATE n_sk</span></div><div class="line"><a name="l01003"></a><span class="lineno"> 1003</span>&#160;<span class="comment">         */</span></div><div class="line"><a name="l01004"></a><span class="lineno"> 1004</span>&#160;      </div><div class="line"><a name="l01005"></a><span class="lineno"> 1005</span>&#160;      <span class="comment">/*2.4.1. Two-stage selection</span></div><div class="line"><a name="l01006"></a><span class="lineno"> 1006</span>&#160;<span class="comment">        The selection process plays an important role of focusing the</span></div><div class="line"><a name="l01007"></a><span class="lineno"> 1007</span>&#160;<span class="comment">        search effort on promising regions in the data space and control-</span></div><div class="line"><a name="l01008"></a><span class="lineno"> 1008</span>&#160;<span class="comment">        ling the speed of convergence. In the clustering process, if the best</span></div><div class="line"><a name="l01009"></a><span class="lineno"> 1009</span>&#160;<span class="comment">        number of clusters is unknwon, Z b can be obtained only when k b</span></div><div class="line"><a name="l01010"></a><span class="lineno"> 1010</span>&#160;<span class="comment">        is found. Therefore, the search of k b should be the first essential</span></div><div class="line"><a name="l01011"></a><span class="lineno"> 1011</span>&#160;<span class="comment">        task to be accomplished. In view of this point, the TGCA adopts</span></div><div class="line"><a name="l01012"></a><span class="lineno"> 1012</span>&#160;<span class="comment">        two-stage selection operation.</span></div><div class="line"><a name="l01013"></a><span class="lineno"> 1013</span>&#160;<span class="comment">      */</span></div><div class="line"><a name="l01014"></a><span class="lineno"> 1014</span>&#160;</div><div class="line"><a name="l01015"></a><span class="lineno"> 1015</span>&#160;      std::vector&lt;gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;* &gt; lvectorchrom_matingPool;</div><div class="line"><a name="l01016"></a><span class="lineno"> 1016</span>&#160;      lvectorchrom_matingPool.reserve</div><div class="line"><a name="l01017"></a><span class="lineno"> 1017</span>&#160;        (aiinp_inParamTGCA.getSizePopulation());</div><div class="line"><a name="l01018"></a><span class="lineno"> 1018</span>&#160;      </div><div class="line"><a name="l01019"></a><span class="lineno"> 1019</span>&#160;      {<span class="comment">/*BEGIN 2.4.1. TWO-STAGE SELECTION</span></div><div class="line"><a name="l01020"></a><span class="lineno"> 1020</span>&#160;<span class="comment">        */</span></div><div class="line"><a name="l01021"></a><span class="lineno"> 1021</span>&#160;</div><div class="line"><a name="l01022"></a><span class="lineno"> 1022</span>&#160;        std::vector&lt;T_METRIC&gt; lvectorT_probDistRouletteWheel;</div><div class="line"><a name="l01023"></a><span class="lineno"> 1023</span>&#160;        </div><div class="line"><a name="l01024"></a><span class="lineno"> 1024</span>&#160;        <span class="keywordflow">if</span> ( lrt_kcon &lt; 1.0 ) { <span class="comment">/*FIRST-STAGE SELECTION*/</span></div><div class="line"><a name="l01025"></a><span class="lineno"> 1025</span>&#160;        </div><div class="line"><a name="l01026"></a><span class="lineno"> 1026</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01027"></a><span class="lineno"> 1027</span>&#160;          geverbosepc_labelstep = <span class="stringliteral">&quot;FIRST-STAGE SELECTION&quot;</span>;</div><div class="line"><a name="l01028"></a><span class="lineno"> 1028</span>&#160;          ++geiinparam_verbose;</div><div class="line"><a name="l01029"></a><span class="lineno"> 1029</span>&#160;          <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01030"></a><span class="lineno"> 1030</span>&#160;            std::cout &lt;&lt; geverbosepc_labelstep</div><div class="line"><a name="l01031"></a><span class="lineno"> 1031</span>&#160;                      &lt;&lt; <span class="stringliteral">&quot;: IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l01032"></a><span class="lineno"> 1032</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;population_size = &quot;</span> &lt;&lt; lvectorchrom_population.size()</div><div class="line"><a name="l01033"></a><span class="lineno"> 1033</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;stringpool_size = &quot;</span> &lt;&lt; lvectorchrom_matingPool.size()</div><div class="line"><a name="l01034"></a><span class="lineno"> 1034</span>&#160;                      &lt;&lt; std::endl;</div><div class="line"><a name="l01035"></a><span class="lineno"> 1035</span>&#160;          }</div><div class="line"><a name="l01036"></a><span class="lineno"> 1036</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01037"></a><span class="lineno"> 1037</span>&#160;</div><div class="line"><a name="l01038"></a><span class="lineno"> 1038</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01039"></a><span class="lineno"> 1039</span>&#160;          <span class="keyword">const</span> <span class="keywordtype">char</span> *lpc_labelSubStep = <span class="stringliteral">&quot;CALCULATE SELECTION PROBABILITY Ps(i) OF Ki&quot;</span>;</div><div class="line"><a name="l01040"></a><span class="lineno"> 1040</span>&#160;          ++geiinparam_verbose;</div><div class="line"><a name="l01041"></a><span class="lineno"> 1041</span>&#160;          <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01042"></a><span class="lineno"> 1042</span>&#160;            std::cout &lt;&lt; lpc_labelSubStep</div><div class="line"><a name="l01043"></a><span class="lineno"> 1043</span>&#160;                      &lt;&lt; <span class="stringliteral">&quot;: IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l01044"></a><span class="lineno"> 1044</span>&#160;                      &lt;&lt; std::endl;</div><div class="line"><a name="l01045"></a><span class="lineno"> 1045</span>&#160;          }</div><div class="line"><a name="l01046"></a><span class="lineno"> 1046</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01047"></a><span class="lineno"> 1047</span>&#160;</div><div class="line"><a name="l01048"></a><span class="lineno"> 1048</span>&#160;          std::map&lt;T_METRIC,uintidx&gt; lmap_chromSameFitness;</div><div class="line"><a name="l01049"></a><span class="lineno"> 1049</span>&#160;</div><div class="line"><a name="l01050"></a><span class="lineno"> 1050</span>&#160;          T_METRIC lrt_alpha = std::exp(-lrt_kcon);</div><div class="line"><a name="l01051"></a><span class="lineno"> 1051</span>&#160;          T_METRIC lrt_sumfx = 0.0;</div><div class="line"><a name="l01052"></a><span class="lineno"> 1052</span>&#160;</div><div class="line"><a name="l01053"></a><span class="lineno"> 1053</span>&#160;          <span class="keywordflow">for</span> (<span class="keyword">auto</span> lchrom_iter: lvectorchrom_population)   {</div><div class="line"><a name="l01054"></a><span class="lineno"> 1054</span>&#160;          </div><div class="line"><a name="l01055"></a><span class="lineno"> 1055</span>&#160;            lrt_sumfx += std::pow(lchrom_iter-&gt;getFitness(),lrt_alpha);</div><div class="line"><a name="l01056"></a><span class="lineno"> 1056</span>&#160;            </div><div class="line"><a name="l01057"></a><span class="lineno"> 1057</span>&#160;            <span class="keyword">auto</span>  litermap_numSamesFitness = </div><div class="line"><a name="l01058"></a><span class="lineno"> 1058</span>&#160;              lmap_chromSameFitness.find(lchrom_iter-&gt;getFitness());</div><div class="line"><a name="l01059"></a><span class="lineno"> 1059</span>&#160;            </div><div class="line"><a name="l01060"></a><span class="lineno"> 1060</span>&#160;            <span class="keywordflow">if</span>  ( litermap_numSamesFitness != lmap_chromSameFitness.end() ) {</div><div class="line"><a name="l01061"></a><span class="lineno"> 1061</span>&#160;              litermap_numSamesFitness-&gt;second++;</div><div class="line"><a name="l01062"></a><span class="lineno"> 1062</span>&#160;            }</div><div class="line"><a name="l01063"></a><span class="lineno"> 1063</span>&#160;            <span class="keywordflow">else</span> { <span class="comment">/*NEW INDIVIDUAL HAVE THE SAME FITNESS*/</span></div><div class="line"><a name="l01064"></a><span class="lineno"> 1064</span>&#160;              lmap_chromSameFitness.insert</div><div class="line"><a name="l01065"></a><span class="lineno"> 1065</span>&#160;                (std::pair&lt;T_METRIC,uintidx&gt;(lchrom_iter-&gt;getFitness(),<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>(1)));</div><div class="line"><a name="l01066"></a><span class="lineno"> 1066</span>&#160;            }</div><div class="line"><a name="l01067"></a><span class="lineno"> 1067</span>&#160;          }</div><div class="line"><a name="l01068"></a><span class="lineno"> 1068</span>&#160;  </div><div class="line"><a name="l01069"></a><span class="lineno"> 1069</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01070"></a><span class="lineno"> 1070</span>&#160;          <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01071"></a><span class="lineno"> 1071</span>&#160;</div><div class="line"><a name="l01072"></a><span class="lineno"> 1072</span>&#160;            T_METRIC lrt_testsumfx = </div><div class="line"><a name="l01073"></a><span class="lineno"> 1073</span>&#160;              std::accumulate</div><div class="line"><a name="l01074"></a><span class="lineno"> 1074</span>&#160;              (lmap_chromSameFitness.begin(),</div><div class="line"><a name="l01075"></a><span class="lineno"> 1075</span>&#160;               lmap_chromSameFitness.end(),</div><div class="line"><a name="l01076"></a><span class="lineno"> 1076</span>&#160;               T_METRIC(0.0), <span class="comment">//VALUE INITIAL</span></div><div class="line"><a name="l01077"></a><span class="lineno"> 1077</span>&#160;               [&amp;](T_METRIC airt_sumPartial,</div><div class="line"><a name="l01078"></a><span class="lineno"> 1078</span>&#160;                   <span class="keyword">const</span> std::pair&lt;T_METRIC,uintidx&gt; &amp;liter_sumDifFitness</div><div class="line"><a name="l01079"></a><span class="lineno"> 1079</span>&#160;                   )</div><div class="line"><a name="l01080"></a><span class="lineno"> 1080</span>&#160;               {  </div><div class="line"><a name="l01081"></a><span class="lineno"> 1081</span>&#160;                 <span class="keywordflow">return</span> airt_sumPartial + std::pow(liter_sumDifFitness.first,lrt_alpha)</div><div class="line"><a name="l01082"></a><span class="lineno"> 1082</span>&#160;                 * (T_METRIC)  liter_sumDifFitness.second;</div><div class="line"><a name="l01083"></a><span class="lineno"> 1083</span>&#160;               }</div><div class="line"><a name="l01084"></a><span class="lineno"> 1084</span>&#160;               );</div><div class="line"><a name="l01085"></a><span class="lineno"> 1085</span>&#160;            </div><div class="line"><a name="l01086"></a><span class="lineno"> 1086</span>&#160;            <span class="keywordtype">bool</span> lbtest_sumFx = (lrt_sumfx == lrt_testsumfx);</div><div class="line"><a name="l01087"></a><span class="lineno"> 1087</span>&#160;            </div><div class="line"><a name="l01088"></a><span class="lineno"> 1088</span>&#160;            std::cout &lt;&lt; lpc_labelSubStep</div><div class="line"><a name="l01089"></a><span class="lineno"> 1089</span>&#160;                      &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l01090"></a><span class="lineno"> 1090</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;lrt_alpha = &quot;</span>  &lt;&lt; lrt_alpha</div><div class="line"><a name="l01091"></a><span class="lineno"> 1091</span>&#160;                      &lt;&lt;  <span class="stringliteral">&quot;\nCHECK:&quot;</span> &lt;&lt; lpc_labelSubStep </div><div class="line"><a name="l01092"></a><span class="lineno"> 1092</span>&#160;                      &lt;&lt; <span class="stringliteral">&quot; lrt_sumfx = &quot;</span> &lt;&lt;  lrt_sumfx</div><div class="line"><a name="l01093"></a><span class="lineno"> 1093</span>&#160;                      &lt;&lt; <span class="stringliteral">&quot; lrt_testsumfx = &quot;</span> &lt;&lt;  lrt_testsumfx &lt;&lt; <span class="charliteral">&#39; &#39;</span> &lt;&lt; lbtest_sumFx</div><div class="line"><a name="l01094"></a><span class="lineno"> 1094</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l01095"></a><span class="lineno"> 1095</span>&#160;</div><div class="line"><a name="l01096"></a><span class="lineno"> 1096</span>&#160;            std::ostringstream lostrstream_labelSameFitness;</div><div class="line"><a name="l01097"></a><span class="lineno"> 1097</span>&#160;            lostrstream_labelSameFitness</div><div class="line"><a name="l01098"></a><span class="lineno"> 1098</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;&lt;POPULATIONSAMEFITNESS:&quot;</span></div><div class="line"><a name="l01099"></a><span class="lineno"> 1099</span>&#160;              &lt;&lt; lpc_labelSubStep</div><div class="line"><a name="l01100"></a><span class="lineno"> 1100</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;:sum,&quot;</span> &lt;&lt; lrt_sumfx;</div><div class="line"><a name="l01101"></a><span class="lineno"> 1101</span>&#160;              </div><div class="line"><a name="l01102"></a><span class="lineno"> 1102</span>&#160;            <a class="code" href="namespaceinout.html#a0c10a45877a347dec0d4ec4e5b05b828">inout::containerprint</a></div><div class="line"><a name="l01103"></a><span class="lineno"> 1103</span>&#160;              (lmap_chromSameFitness.begin(),</div><div class="line"><a name="l01104"></a><span class="lineno"> 1104</span>&#160;               lmap_chromSameFitness.end(),</div><div class="line"><a name="l01105"></a><span class="lineno"> 1105</span>&#160;               [](<span class="keyword">const</span> std::pair&lt;T_METRIC,uintidx&gt;&amp; lpairmap_sameFitness)</div><div class="line"><a name="l01106"></a><span class="lineno"> 1106</span>&#160;               -&gt; std::string</div><div class="line"><a name="l01107"></a><span class="lineno"> 1107</span>&#160;               {</div><div class="line"><a name="l01108"></a><span class="lineno"> 1108</span>&#160;                 std::ostringstream lostrstream_label;</div><div class="line"><a name="l01109"></a><span class="lineno"> 1109</span>&#160;                 lostrstream_label</div><div class="line"><a name="l01110"></a><span class="lineno"> 1110</span>&#160;                   &lt;&lt; lpairmap_sameFitness.first &lt;&lt; <span class="charliteral">&#39;,&#39;</span></div><div class="line"><a name="l01111"></a><span class="lineno"> 1111</span>&#160;                   &lt;&lt; lpairmap_sameFitness.second;</div><div class="line"><a name="l01112"></a><span class="lineno"> 1112</span>&#160;                 </div><div class="line"><a name="l01113"></a><span class="lineno"> 1113</span>&#160;                 <span class="keywordflow">return</span> lostrstream_label.str();</div><div class="line"><a name="l01114"></a><span class="lineno"> 1114</span>&#160;               },</div><div class="line"><a name="l01115"></a><span class="lineno"> 1115</span>&#160;               std::cout,</div><div class="line"><a name="l01116"></a><span class="lineno"> 1116</span>&#160;               lostrstream_labelSameFitness.str().c_str(),</div><div class="line"><a name="l01117"></a><span class="lineno"> 1117</span>&#160;               <span class="charliteral">&#39;;&#39;</span></div><div class="line"><a name="l01118"></a><span class="lineno"> 1118</span>&#160;               );</div><div class="line"><a name="l01119"></a><span class="lineno"> 1119</span>&#160;            std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l01120"></a><span class="lineno"> 1120</span>&#160;          }</div><div class="line"><a name="l01121"></a><span class="lineno"> 1121</span>&#160;          --geiinparam_verbose;</div><div class="line"><a name="l01122"></a><span class="lineno"> 1122</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES</span></div><div class="line"><a name="l01123"></a><span class="lineno"> 1123</span>&#160;<span class="comment">         END CALCULATE SELECTION PROBABILITY Ps(i) OF Ki&quot;;</span></div><div class="line"><a name="l01124"></a><span class="lineno"> 1124</span>&#160;<span class="comment">       */</span><span class="preprocessor"></span></div><div class="line"><a name="l01125"></a><span class="lineno"> 1125</span>&#160;          </div><div class="line"><a name="l01126"></a><span class="lineno"> 1126</span>&#160;          lvectorT_probDistRouletteWheel =</div><div class="line"><a name="l01127"></a><span class="lineno"> 1127</span>&#160;            <a class="code" href="namespaceprob.html#aa737d76e6416a765f004cd211eff712d">prob::makeDistRouletteWheel</a></div><div class="line"><a name="l01128"></a><span class="lineno"> 1128</span>&#160;            (lvectorchrom_population.begin(),</div><div class="line"><a name="l01129"></a><span class="lineno"> 1129</span>&#160;             lvectorchrom_population.end(),</div><div class="line"><a name="l01130"></a><span class="lineno"> 1130</span>&#160;             [&amp;](<span class="keyword">const</span> <a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;</a>* lchrom_iter) -&gt; T_METRIC</div><div class="line"><a name="l01131"></a><span class="lineno"> 1131</span>&#160;             {</div><div class="line"><a name="l01132"></a><span class="lineno"> 1132</span>&#160;               <span class="keyword">auto</span> litermap_numSamesFitness = </div><div class="line"><a name="l01133"></a><span class="lineno"> 1133</span>&#160;                 lmap_chromSameFitness.find(lchrom_iter-&gt;getFitness());</div><div class="line"><a name="l01134"></a><span class="lineno"> 1134</span>&#160;               <span class="keywordflow">if</span>  ( litermap_numSamesFitness == lmap_chromSameFitness.end() )</div><div class="line"><a name="l01135"></a><span class="lineno"> 1135</span>&#160;                 <span class="keywordflow">throw</span> std::runtime_error</div><div class="line"><a name="l01136"></a><span class="lineno"> 1136</span>&#160;                   (<span class="stringliteral">&quot;tgca_vkcentroid:&quot;</span></div><div class="line"><a name="l01137"></a><span class="lineno"> 1137</span>&#160;                    <span class="stringliteral">&quot; the algorithm failed in two-stage selection&quot;</span>);</div><div class="line"><a name="l01138"></a><span class="lineno"> 1138</span>&#160;               </div><div class="line"><a name="l01139"></a><span class="lineno"> 1139</span>&#160;               T_METRIC lrt_sumfXjnotinSs =</div><div class="line"><a name="l01140"></a><span class="lineno"> 1140</span>&#160;                 lrt_sumfx -</div><div class="line"><a name="l01141"></a><span class="lineno"> 1141</span>&#160;                 ( std::pow(litermap_numSamesFitness-&gt;first,lrt_alpha)</div><div class="line"><a name="l01142"></a><span class="lineno"> 1142</span>&#160;                   * (T_METRIC) litermap_numSamesFitness-&gt;second );</div><div class="line"><a name="l01143"></a><span class="lineno"> 1143</span>&#160;</div><div class="line"><a name="l01144"></a><span class="lineno"> 1144</span>&#160;               <span class="keywordflow">return</span> (lchrom_iter-&gt;getFitness()!= 0.0)? 1.0 /</div><div class="line"><a name="l01145"></a><span class="lineno"> 1145</span>&#160;                 ( T_METRIC(litermap_numSamesFitness-&gt;second) +</div><div class="line"><a name="l01146"></a><span class="lineno"> 1146</span>&#160;                   lrt_sumfXjnotinSs/std::pow(lchrom_iter-&gt;getFitness(),lrt_alpha)):0.0;</div><div class="line"><a name="l01147"></a><span class="lineno"> 1147</span>&#160;             }</div><div class="line"><a name="l01148"></a><span class="lineno"> 1148</span>&#160;             );</div><div class="line"><a name="l01149"></a><span class="lineno"> 1149</span>&#160;</div><div class="line"><a name="l01150"></a><span class="lineno"> 1150</span>&#160;          <span class="comment">/*ELITISMO</span></div><div class="line"><a name="l01151"></a><span class="lineno"> 1151</span>&#160;<span class="comment">           */</span></div><div class="line"><a name="l01152"></a><span class="lineno"> 1152</span>&#160;          lvectorchrom_matingPool.push_back</div><div class="line"><a name="l01153"></a><span class="lineno"> 1153</span>&#160;            (<span class="keyword">new</span> <a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;</a>(lochrom_best));</div><div class="line"><a name="l01154"></a><span class="lineno"> 1154</span>&#160;</div><div class="line"><a name="l01155"></a><span class="lineno"> 1155</span>&#160;          <span class="keywordflow">for</span> (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> luintidx_i = 1; </div><div class="line"><a name="l01156"></a><span class="lineno"> 1156</span>&#160;               luintidx_i &lt; aiinp_inParamTGCA.getSizePopulation(); </div><div class="line"><a name="l01157"></a><span class="lineno"> 1157</span>&#160;               luintidx_i++) </div><div class="line"><a name="l01158"></a><span class="lineno"> 1158</span>&#160;            {      </div><div class="line"><a name="l01159"></a><span class="lineno"> 1159</span>&#160;              <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> luintidx_chrom = </div><div class="line"><a name="l01160"></a><span class="lineno"> 1160</span>&#160;                <a class="code" href="namespacegaselect.html#ae9cfd02b23815a3c1291b4adb0b7658a">gaselect::getIdxRouletteWheel</a></div><div class="line"><a name="l01161"></a><span class="lineno"> 1161</span>&#160;                (lvectorT_probDistRouletteWheel,</div><div class="line"><a name="l01162"></a><span class="lineno"> 1162</span>&#160;                 <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>(0)</div><div class="line"><a name="l01163"></a><span class="lineno"> 1163</span>&#160;                 );</div><div class="line"><a name="l01164"></a><span class="lineno"> 1164</span>&#160;              lvectorchrom_matingPool.push_back</div><div class="line"><a name="l01165"></a><span class="lineno"> 1165</span>&#160;                (<span class="keyword">new</span> <a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;</a></div><div class="line"><a name="l01166"></a><span class="lineno"> 1166</span>&#160;                 (*lvectorchrom_population.at(luintidx_chrom))</div><div class="line"><a name="l01167"></a><span class="lineno"> 1167</span>&#160;                 );</div><div class="line"><a name="l01168"></a><span class="lineno"> 1168</span>&#160;</div><div class="line"><a name="l01169"></a><span class="lineno"> 1169</span>&#160;            }</div><div class="line"><a name="l01170"></a><span class="lineno"> 1170</span>&#160;</div><div class="line"><a name="l01171"></a><span class="lineno"> 1171</span>&#160;          <span class="keywordflow">for</span> (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lui_i = 0; lui_i &lt; lvectorchrom_population.size(); ++lui_i) {</div><div class="line"><a name="l01172"></a><span class="lineno"> 1172</span>&#160;            <span class="keyword">delete</span>  lvectorchrom_population[lui_i];</div><div class="line"><a name="l01173"></a><span class="lineno"> 1173</span>&#160;          }</div><div class="line"><a name="l01174"></a><span class="lineno"> 1174</span>&#160;         </div><div class="line"><a name="l01175"></a><span class="lineno"> 1175</span>&#160;          lvectorchrom_population.clear();</div><div class="line"><a name="l01176"></a><span class="lineno"> 1176</span>&#160;       </div><div class="line"><a name="l01177"></a><span class="lineno"> 1177</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01178"></a><span class="lineno"> 1178</span>&#160;          <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01179"></a><span class="lineno"> 1179</span>&#160;            std::cout &lt;&lt; geverbosepc_labelstep</div><div class="line"><a name="l01180"></a><span class="lineno"> 1180</span>&#160;                      &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l01181"></a><span class="lineno"> 1181</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;population_size = &quot;</span> &lt;&lt; lvectorchrom_population.size()</div><div class="line"><a name="l01182"></a><span class="lineno"> 1182</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;stringpool_size = &quot;</span> &lt;&lt; lvectorchrom_matingPool.size()</div><div class="line"><a name="l01183"></a><span class="lineno"> 1183</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l01184"></a><span class="lineno"> 1184</span>&#160;          }</div><div class="line"><a name="l01185"></a><span class="lineno"> 1185</span>&#160;          --geiinparam_verbose;</div><div class="line"><a name="l01186"></a><span class="lineno"> 1186</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES</span></div><div class="line"><a name="l01187"></a><span class="lineno"> 1187</span>&#160;<span class="comment">         END FIRST-STAGE SELECTION</span></div><div class="line"><a name="l01188"></a><span class="lineno"> 1188</span>&#160;<span class="comment">       */</span><span class="preprocessor"></span></div><div class="line"><a name="l01189"></a><span class="lineno"> 1189</span>&#160;                </div><div class="line"><a name="l01190"></a><span class="lineno"> 1190</span>&#160;        } <span class="keywordflow">else</span> {</div><div class="line"><a name="l01191"></a><span class="lineno"> 1191</span>&#160;        </div><div class="line"><a name="l01192"></a><span class="lineno"> 1192</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01193"></a><span class="lineno"> 1193</span>&#160;          geverbosepc_labelstep = <span class="stringliteral">&quot;SECOND-STAGE SELECTION&quot;</span>;</div><div class="line"><a name="l01194"></a><span class="lineno"> 1194</span>&#160;          ++geiinparam_verbose;</div><div class="line"><a name="l01195"></a><span class="lineno"> 1195</span>&#160;          <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01196"></a><span class="lineno"> 1196</span>&#160;            std::cout &lt;&lt; geverbosepc_labelstep</div><div class="line"><a name="l01197"></a><span class="lineno"> 1197</span>&#160;                      &lt;&lt; <span class="stringliteral">&quot;: IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l01198"></a><span class="lineno"> 1198</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;population_size = &quot;</span> &lt;&lt; lvectorchrom_population.size()</div><div class="line"><a name="l01199"></a><span class="lineno"> 1199</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;stringpool_size = &quot;</span> &lt;&lt; lvectorchrom_matingPool.size()</div><div class="line"><a name="l01200"></a><span class="lineno"> 1200</span>&#160;              <span class="comment">//&lt;&lt; &#39;,&#39; &lt;&lt; &quot;lui_nsk = &quot; &lt;&lt; lui_nsk</span></div><div class="line"><a name="l01201"></a><span class="lineno"> 1201</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;lrt_kcon = &quot;</span> &lt;&lt; lrt_kcon</div><div class="line"><a name="l01202"></a><span class="lineno"> 1202</span>&#160;                      &lt;&lt; std::endl;</div><div class="line"><a name="l01203"></a><span class="lineno"> 1203</span>&#160;          }</div><div class="line"><a name="l01204"></a><span class="lineno"> 1204</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01205"></a><span class="lineno"> 1205</span>&#160;</div><div class="line"><a name="l01206"></a><span class="lineno"> 1206</span>&#160;          lvectorT_probDistRouletteWheel =</div><div class="line"><a name="l01207"></a><span class="lineno"> 1207</span>&#160;            <a class="code" href="namespaceprob.html#aa737d76e6416a765f004cd211eff712d">prob::makeDistRouletteWheel</a></div><div class="line"><a name="l01208"></a><span class="lineno"> 1208</span>&#160;            (lvectorchrom_population.begin(),lvectorchrom_population.end(),</div><div class="line"><a name="l01209"></a><span class="lineno"> 1209</span>&#160;             [](<span class="keyword">const</span> <a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;</a>* lchromfixleng_iter) -&gt; T_METRIC</div><div class="line"><a name="l01210"></a><span class="lineno"> 1210</span>&#160;             {</div><div class="line"><a name="l01211"></a><span class="lineno"> 1211</span>&#160;               <span class="keywordflow">return</span> lchromfixleng_iter-&gt;getFitness();</div><div class="line"><a name="l01212"></a><span class="lineno"> 1212</span>&#160;             }</div><div class="line"><a name="l01213"></a><span class="lineno"> 1213</span>&#160;             );</div><div class="line"><a name="l01214"></a><span class="lineno"> 1214</span>&#160;</div><div class="line"><a name="l01215"></a><span class="lineno"> 1215</span>&#160;</div><div class="line"><a name="l01216"></a><span class="lineno"> 1216</span>&#160;          <span class="comment">/*ELITISMO</span></div><div class="line"><a name="l01217"></a><span class="lineno"> 1217</span>&#160;<span class="comment">           */</span></div><div class="line"><a name="l01218"></a><span class="lineno"> 1218</span>&#160;          lvectorchrom_matingPool.push_back</div><div class="line"><a name="l01219"></a><span class="lineno"> 1219</span>&#160;            (<span class="keyword">new</span> <a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;</a>(lochrom_best));</div><div class="line"><a name="l01220"></a><span class="lineno"> 1220</span>&#160;</div><div class="line"><a name="l01221"></a><span class="lineno"> 1221</span>&#160;          <span class="keywordflow">for</span> (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> luintidx_i = 1; </div><div class="line"><a name="l01222"></a><span class="lineno"> 1222</span>&#160;               luintidx_i &lt; aiinp_inParamTGCA.getSizePopulation(); </div><div class="line"><a name="l01223"></a><span class="lineno"> 1223</span>&#160;               luintidx_i++) </div><div class="line"><a name="l01224"></a><span class="lineno"> 1224</span>&#160;            {</div><div class="line"><a name="l01225"></a><span class="lineno"> 1225</span>&#160;            </div><div class="line"><a name="l01226"></a><span class="lineno"> 1226</span>&#160;              <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> luintidx_chrom = </div><div class="line"><a name="l01227"></a><span class="lineno"> 1227</span>&#160;                <a class="code" href="namespacegaselect.html#ae9cfd02b23815a3c1291b4adb0b7658a">gaselect::getIdxRouletteWheel</a></div><div class="line"><a name="l01228"></a><span class="lineno"> 1228</span>&#160;                (lvectorT_probDistRouletteWheel,</div><div class="line"><a name="l01229"></a><span class="lineno"> 1229</span>&#160;                 <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>(0)</div><div class="line"><a name="l01230"></a><span class="lineno"> 1230</span>&#160;                 );</div><div class="line"><a name="l01231"></a><span class="lineno"> 1231</span>&#160;            </div><div class="line"><a name="l01232"></a><span class="lineno"> 1232</span>&#160;              lvectorchrom_matingPool.push_back</div><div class="line"><a name="l01233"></a><span class="lineno"> 1233</span>&#160;                (<span class="keyword">new</span> <a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;</a></div><div class="line"><a name="l01234"></a><span class="lineno"> 1234</span>&#160;                 (*lvectorchrom_population.at(luintidx_chrom))</div><div class="line"><a name="l01235"></a><span class="lineno"> 1235</span>&#160;                 );</div><div class="line"><a name="l01236"></a><span class="lineno"> 1236</span>&#160;</div><div class="line"><a name="l01237"></a><span class="lineno"> 1237</span>&#160;            }</div><div class="line"><a name="l01238"></a><span class="lineno"> 1238</span>&#160;</div><div class="line"><a name="l01239"></a><span class="lineno"> 1239</span>&#160;          <span class="keywordflow">for</span> (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a> lui_i = 0; lui_i &lt; lvectorchrom_population.size(); ++lui_i) {</div><div class="line"><a name="l01240"></a><span class="lineno"> 1240</span>&#160;            <span class="keyword">delete</span>  lvectorchrom_population[lui_i];</div><div class="line"><a name="l01241"></a><span class="lineno"> 1241</span>&#160;          }</div><div class="line"><a name="l01242"></a><span class="lineno"> 1242</span>&#160;         </div><div class="line"><a name="l01243"></a><span class="lineno"> 1243</span>&#160;          lvectorchrom_population.clear();</div><div class="line"><a name="l01244"></a><span class="lineno"> 1244</span>&#160;</div><div class="line"><a name="l01245"></a><span class="lineno"> 1245</span>&#160;</div><div class="line"><a name="l01246"></a><span class="lineno"> 1246</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01247"></a><span class="lineno"> 1247</span>&#160;          <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01248"></a><span class="lineno"> 1248</span>&#160;            std::cout &lt;&lt; geverbosepc_labelstep</div><div class="line"><a name="l01249"></a><span class="lineno"> 1249</span>&#160;                      &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l01250"></a><span class="lineno"> 1250</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;population_size = &quot;</span> &lt;&lt; lvectorchrom_population.size()</div><div class="line"><a name="l01251"></a><span class="lineno"> 1251</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;stringpool_size = &quot;</span> &lt;&lt; lvectorchrom_matingPool.size()</div><div class="line"><a name="l01252"></a><span class="lineno"> 1252</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l01253"></a><span class="lineno"> 1253</span>&#160;          }</div><div class="line"><a name="l01254"></a><span class="lineno"> 1254</span>&#160;          --geiinparam_verbose;</div><div class="line"><a name="l01255"></a><span class="lineno"> 1255</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES</span></div><div class="line"><a name="l01256"></a><span class="lineno"> 1256</span>&#160;<span class="comment">         END FIRST-STAGE SELECTION</span></div><div class="line"><a name="l01257"></a><span class="lineno"> 1257</span>&#160;<span class="comment">       */</span><span class="preprocessor"></span></div><div class="line"><a name="l01258"></a><span class="lineno"> 1258</span>&#160;</div><div class="line"><a name="l01259"></a><span class="lineno"> 1259</span>&#160;        } <span class="comment">/*ELSE SECOND-STAGE SELECTION*/</span> </div><div class="line"><a name="l01260"></a><span class="lineno"> 1260</span>&#160;</div><div class="line"><a name="l01261"></a><span class="lineno"> 1261</span>&#160;      </div><div class="line"><a name="l01262"></a><span class="lineno"> 1262</span>&#160;      } <span class="comment">/*END 2.4.1. TWO-STAGE SELECTION</span></div><div class="line"><a name="l01263"></a><span class="lineno"> 1263</span>&#160;<span class="comment">         */</span></div><div class="line"><a name="l01264"></a><span class="lineno"> 1264</span>&#160;</div><div class="line"><a name="l01265"></a><span class="lineno"> 1265</span>&#160;      </div><div class="line"><a name="l01266"></a><span class="lineno"> 1266</span>&#160;      <span class="comment">/*2.4.2. Parallel crossover</span></div><div class="line"><a name="l01267"></a><span class="lineno"> 1267</span>&#160;<span class="comment">       */</span></div><div class="line"><a name="l01268"></a><span class="lineno"> 1268</span>&#160;      { <span class="comment">/*BEGIN CROSSOVER*/</span></div><div class="line"><a name="l01269"></a><span class="lineno"> 1269</span>&#160;</div><div class="line"><a name="l01270"></a><span class="lineno"> 1270</span>&#160;     </div><div class="line"><a name="l01271"></a><span class="lineno"> 1271</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01272"></a><span class="lineno"> 1272</span>&#160;        geverbosepc_labelstep = <span class="stringliteral">&quot;PARALLEL CROSSOVER&quot;</span>;</div><div class="line"><a name="l01273"></a><span class="lineno"> 1273</span>&#160;        ++geiinparam_verbose;</div><div class="line"><a name="l01274"></a><span class="lineno"> 1274</span>&#160;        <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01275"></a><span class="lineno"> 1275</span>&#160;          std::cout &lt;&lt; geverbosepc_labelstep</div><div class="line"><a name="l01276"></a><span class="lineno"> 1276</span>&#160;                    &lt;&lt; <span class="stringliteral">&quot;: IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l01277"></a><span class="lineno"> 1277</span>&#160;                    &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;stringpool_size = &quot;</span> &lt;&lt; lvectorchrom_matingPool.size()</div><div class="line"><a name="l01278"></a><span class="lineno"> 1278</span>&#160;                    &lt;&lt; std::endl;</div><div class="line"><a name="l01279"></a><span class="lineno"> 1279</span>&#160;        }</div><div class="line"><a name="l01280"></a><span class="lineno"> 1280</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01281"></a><span class="lineno"> 1281</span>&#160;</div><div class="line"><a name="l01282"></a><span class="lineno"> 1282</span>&#160;        <span class="keyword">auto</span> &amp;&amp;lvectoriter_subpopulations = </div><div class="line"><a name="l01283"></a><span class="lineno"> 1283</span>&#160;          <a class="code" href="namespacevectorutils.html#af3724cf77c2c17bafe3e0309331c5e9a">vectorutils::partition</a></div><div class="line"><a name="l01284"></a><span class="lineno"> 1284</span>&#160;          (lvectorchrom_matingPool.begin(),</div><div class="line"><a name="l01285"></a><span class="lineno"> 1285</span>&#160;           lvectorchrom_matingPool.end(),</div><div class="line"><a name="l01286"></a><span class="lineno"> 1286</span>&#160;           aiinp_inParamTGCA.getNumSubpopulationsCross()</div><div class="line"><a name="l01287"></a><span class="lineno"> 1287</span>&#160;           );</div><div class="line"><a name="l01288"></a><span class="lineno"> 1288</span>&#160;</div><div class="line"><a name="l01289"></a><span class="lineno"> 1289</span>&#160;        <span class="keyword">auto</span> liter_beginSubpopulation = lvectoriter_subpopulations.begin();</div><div class="line"><a name="l01290"></a><span class="lineno"> 1290</span>&#160;        <span class="keyword">auto</span> liter_endSubpopulation   = lvectoriter_subpopulations.begin();</div><div class="line"><a name="l01291"></a><span class="lineno"> 1291</span>&#160;      </div><div class="line"><a name="l01292"></a><span class="lineno"> 1292</span>&#160;        <span class="keywordflow">for</span> ( ++liter_endSubpopulation;</div><div class="line"><a name="l01293"></a><span class="lineno"> 1293</span>&#160;              liter_endSubpopulation != lvectoriter_subpopulations.end();</div><div class="line"><a name="l01294"></a><span class="lineno"> 1294</span>&#160;              ++liter_beginSubpopulation, ++liter_endSubpopulation)</div><div class="line"><a name="l01295"></a><span class="lineno"> 1295</span>&#160;          {</div><div class="line"><a name="l01296"></a><span class="lineno"> 1296</span>&#160;            <span class="comment">/*BEGIN: Crossover subpopulation</span></div><div class="line"><a name="l01297"></a><span class="lineno"> 1297</span>&#160;<span class="comment">             */</span></div><div class="line"><a name="l01298"></a><span class="lineno"> 1298</span>&#160;            <span class="keyword">auto</span> lt_numChromSubPopulation =</div><div class="line"><a name="l01299"></a><span class="lineno"> 1299</span>&#160;              std::distance(*liter_beginSubpopulation,*liter_endSubpopulation);</div><div class="line"><a name="l01300"></a><span class="lineno"> 1300</span>&#160;                  </div><div class="line"><a name="l01301"></a><span class="lineno"> 1301</span>&#160;            <span class="keyword">auto</span> jchrom_matingPool = *liter_beginSubpopulation;</div><div class="line"><a name="l01302"></a><span class="lineno"> 1302</span>&#160;</div><div class="line"><a name="l01303"></a><span class="lineno"> 1303</span>&#160;            <span class="keywordflow">if</span> ( ( lt_numChromSubPopulation % 2 ) != 0 ) {</div><div class="line"><a name="l01304"></a><span class="lineno"> 1304</span>&#160;              ++jchrom_matingPool;</div><div class="line"><a name="l01305"></a><span class="lineno"> 1305</span>&#160;            }</div><div class="line"><a name="l01306"></a><span class="lineno"> 1306</span>&#160;            <span class="keywordflow">while</span> ( jchrom_matingPool !=  *liter_endSubpopulation ) { </div><div class="line"><a name="l01307"></a><span class="lineno"> 1307</span>&#160;</div><div class="line"><a name="l01308"></a><span class="lineno"> 1308</span>&#160;              <span class="keyword">auto</span> lchrom_individualXi  = jchrom_matingPool;</div><div class="line"><a name="l01309"></a><span class="lineno"> 1309</span>&#160;              ++jchrom_matingPool;</div><div class="line"><a name="l01310"></a><span class="lineno"> 1310</span>&#160;              <span class="keyword">auto</span> lchrom_individualXj  = jchrom_matingPool;</div><div class="line"><a name="l01311"></a><span class="lineno"> 1311</span>&#160;              ++jchrom_matingPool;</div><div class="line"><a name="l01312"></a><span class="lineno"> 1312</span>&#160;</div><div class="line"><a name="l01313"></a><span class="lineno"> 1313</span>&#160;              <span class="keywordflow">if</span> ( uniformdis_real01(<a class="code" href="clustering__operator__centroids_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>) <span class="comment">//if  Crossover</span></div><div class="line"><a name="l01314"></a><span class="lineno"> 1314</span>&#160;                   &lt; aiinp_inParamTGCA.getProbCrossover() ) {</div><div class="line"><a name="l01315"></a><span class="lineno"> 1315</span>&#160;             </div><div class="line"><a name="l01316"></a><span class="lineno"> 1316</span>&#160;                <a class="code" href="namespacegagenericop.html#a7dd4f4513a4c1ee9e74f02938d860c4c">gagenericop::onePointCrossover</a></div><div class="line"><a name="l01317"></a><span class="lineno"> 1317</span>&#160;                  (*(*lchrom_individualXi),</div><div class="line"><a name="l01318"></a><span class="lineno"> 1318</span>&#160;                   *(*lchrom_individualXj)</div><div class="line"><a name="l01319"></a><span class="lineno"> 1319</span>&#160;                   );</div><div class="line"><a name="l01320"></a><span class="lineno"> 1320</span>&#160;                (*lchrom_individualXi)-&gt;setObjetiveFunc(<a class="code" href="unsupervised__measures_8hpp.html#a2b678af6e0485eb4b6a1c56ba181d87d">measuare_undefObjetiveFunc</a>(T_METRIC));</div><div class="line"><a name="l01321"></a><span class="lineno"> 1321</span>&#160;                (*lchrom_individualXj)-&gt;setObjetiveFunc(<a class="code" href="unsupervised__measures_8hpp.html#a2b678af6e0485eb4b6a1c56ba181d87d">measuare_undefObjetiveFunc</a>(T_METRIC));</div><div class="line"><a name="l01322"></a><span class="lineno"> 1322</span>&#160;</div><div class="line"><a name="l01323"></a><span class="lineno"> 1323</span>&#160;              } <span class="comment">//if  Crossover</span></div><div class="line"><a name="l01324"></a><span class="lineno"> 1324</span>&#160;         </div><div class="line"><a name="l01325"></a><span class="lineno"> 1325</span>&#160;            } <span class="comment">/*while Crossover*/</span></div><div class="line"><a name="l01326"></a><span class="lineno"> 1326</span>&#160;          </div><div class="line"><a name="l01327"></a><span class="lineno"> 1327</span>&#160;            <span class="comment">/*END: Crossover subpopulation</span></div><div class="line"><a name="l01328"></a><span class="lineno"> 1328</span>&#160;<span class="comment">             */</span></div><div class="line"><a name="l01329"></a><span class="lineno"> 1329</span>&#160;</div><div class="line"><a name="l01330"></a><span class="lineno"> 1330</span>&#160;          } <span class="comment">/*for subpopulation*/</span></div><div class="line"><a name="l01331"></a><span class="lineno"> 1331</span>&#160;</div><div class="line"><a name="l01332"></a><span class="lineno"> 1332</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01333"></a><span class="lineno"> 1333</span>&#160;        <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01334"></a><span class="lineno"> 1334</span>&#160;          std::cout &lt;&lt; geverbosepc_labelstep</div><div class="line"><a name="l01335"></a><span class="lineno"> 1335</span>&#160;                    &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l01336"></a><span class="lineno"> 1336</span>&#160;                    &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;stringpool_size = &quot;</span> &lt;&lt; lvectorchrom_matingPool.size()</div><div class="line"><a name="l01337"></a><span class="lineno"> 1337</span>&#160;                    &lt;&lt; std::endl;</div><div class="line"><a name="l01338"></a><span class="lineno"> 1338</span>&#160;        }</div><div class="line"><a name="l01339"></a><span class="lineno"> 1339</span>&#160;        --geiinparam_verbose;</div><div class="line"><a name="l01340"></a><span class="lineno"> 1340</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01341"></a><span class="lineno"> 1341</span>&#160;      </div><div class="line"><a name="l01342"></a><span class="lineno"> 1342</span>&#160;      } <span class="comment">/*END CROSSOVER*/</span></div><div class="line"><a name="l01343"></a><span class="lineno"> 1343</span>&#160;</div><div class="line"><a name="l01344"></a><span class="lineno"> 1344</span>&#160;      <span class="comment">/*2.4.3. Two-stage mutation</span></div><div class="line"><a name="l01345"></a><span class="lineno"> 1345</span>&#160;<span class="comment">        Find the optimal partition in S, the mutation probabilty pm </span></div><div class="line"><a name="l01346"></a><span class="lineno"> 1346</span>&#160;<span class="comment">        varies with ki and the variation tendency of p m can be also </span></div><div class="line"><a name="l01347"></a><span class="lineno"> 1347</span>&#160;<span class="comment">        divided into two stages.</span></div><div class="line"><a name="l01348"></a><span class="lineno"> 1348</span>&#160;<span class="comment">      */</span></div><div class="line"><a name="l01349"></a><span class="lineno"> 1349</span>&#160;    </div><div class="line"><a name="l01350"></a><span class="lineno"> 1350</span>&#160;      { <span class="comment">/*(C). TWO-STAGE MUTATION*/</span></div><div class="line"><a name="l01351"></a><span class="lineno"> 1351</span>&#160;</div><div class="line"><a name="l01352"></a><span class="lineno"> 1352</span>&#160;      </div><div class="line"><a name="l01353"></a><span class="lineno"> 1353</span>&#160;        <span class="comment">/*CALCULATE n_sk maximum number of individuals with the </span></div><div class="line"><a name="l01354"></a><span class="lineno"> 1354</span>&#160;<span class="comment">          same number of clusters in the current population.</span></div><div class="line"><a name="l01355"></a><span class="lineno"> 1355</span>&#160;<span class="comment">        */</span></div><div class="line"><a name="l01356"></a><span class="lineno"> 1356</span>&#160;        { <span class="comment">/*BEGIN CALCULATE n_sk*/</span></div><div class="line"><a name="l01357"></a><span class="lineno"> 1357</span>&#160;          <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>        lui_nsk  = 0;</div><div class="line"><a name="l01358"></a><span class="lineno"> 1358</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01359"></a><span class="lineno"> 1359</span>&#160;          geverbosepc_labelstep = <span class="stringliteral">&quot;CALCULATE FOR MUTATION n_sk(k,NChrom)&quot;</span>;</div><div class="line"><a name="l01360"></a><span class="lineno"> 1360</span>&#160;          ++geiinparam_verbose;</div><div class="line"><a name="l01361"></a><span class="lineno"> 1361</span>&#160;          <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01362"></a><span class="lineno"> 1362</span>&#160;            std::cout &lt;&lt; geverbosepc_labelstep</div><div class="line"><a name="l01363"></a><span class="lineno"> 1363</span>&#160;                      &lt;&lt; <span class="stringliteral">&quot;: IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l01364"></a><span class="lineno"> 1364</span>&#160;                      &lt;&lt; std::endl;</div><div class="line"><a name="l01365"></a><span class="lineno"> 1365</span>&#160;          }</div><div class="line"><a name="l01366"></a><span class="lineno"> 1366</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01367"></a><span class="lineno"> 1367</span>&#160;        </div><div class="line"><a name="l01368"></a><span class="lineno"> 1368</span>&#160;          std::map&lt;T_CLUSTERIDX,uintidx&gt; lmap_chromSameNumclusterK;</div><div class="line"><a name="l01369"></a><span class="lineno"> 1369</span>&#160;      </div><div class="line"><a name="l01370"></a><span class="lineno"> 1370</span>&#160;          <span class="keywordflow">for</span> (<span class="keyword">auto</span> lchrom_iter: lvectorchrom_matingPool ) {</div><div class="line"><a name="l01371"></a><span class="lineno"> 1371</span>&#160;            T_CLUSTERIDX lmmidx_numClusterK =</div><div class="line"><a name="l01372"></a><span class="lineno"> 1372</span>&#160;              T_CLUSTERIDX</div><div class="line"><a name="l01373"></a><span class="lineno"> 1373</span>&#160;              (lchrom_iter-&gt;getStringSize() / <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>()</div><div class="line"><a name="l01374"></a><span class="lineno"> 1374</span>&#160;               );      </div><div class="line"><a name="l01375"></a><span class="lineno"> 1375</span>&#160;            <span class="keyword">auto</span> litermap_numSamesClusterK = </div><div class="line"><a name="l01376"></a><span class="lineno"> 1376</span>&#160;              lmap_chromSameNumclusterK.find(lmmidx_numClusterK);</div><div class="line"><a name="l01377"></a><span class="lineno"> 1377</span>&#160;            <span class="keywordflow">if</span>  ( litermap_numSamesClusterK != lmap_chromSameNumclusterK.end() ) {</div><div class="line"><a name="l01378"></a><span class="lineno"> 1378</span>&#160;              litermap_numSamesClusterK-&gt;second++;</div><div class="line"><a name="l01379"></a><span class="lineno"> 1379</span>&#160;            }</div><div class="line"><a name="l01380"></a><span class="lineno"> 1380</span>&#160;            <span class="keywordflow">else</span> { <span class="comment">//NEW NUM CLUSTERK</span></div><div class="line"><a name="l01381"></a><span class="lineno"> 1381</span>&#160;              lmap_chromSameNumclusterK.insert</div><div class="line"><a name="l01382"></a><span class="lineno"> 1382</span>&#160;                (std::pair&lt;T_CLUSTERIDX,uintidx&gt;(lmmidx_numClusterK,<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>(1)));</div><div class="line"><a name="l01383"></a><span class="lineno"> 1383</span>&#160;            }</div><div class="line"><a name="l01384"></a><span class="lineno"> 1384</span>&#160;          }</div><div class="line"><a name="l01385"></a><span class="lineno"> 1385</span>&#160;</div><div class="line"><a name="l01386"></a><span class="lineno"> 1386</span>&#160;          <span class="keyword">auto</span> litermap_max = std::max_element</div><div class="line"><a name="l01387"></a><span class="lineno"> 1387</span>&#160;            (</div><div class="line"><a name="l01388"></a><span class="lineno"> 1388</span>&#160;             std::begin(lmap_chromSameNumclusterK),</div><div class="line"><a name="l01389"></a><span class="lineno"> 1389</span>&#160;             std::end(lmap_chromSameNumclusterK),</div><div class="line"><a name="l01390"></a><span class="lineno"> 1390</span>&#160;             [] (<span class="keyword">const</span> std::pair&lt;T_CLUSTERIDX,uintidx&gt; &amp;litermap_it1,</div><div class="line"><a name="l01391"></a><span class="lineno"> 1391</span>&#160;                 <span class="keyword">const</span> std::pair&lt;T_CLUSTERIDX,uintidx&gt; &amp;litermap_it2)</div><div class="line"><a name="l01392"></a><span class="lineno"> 1392</span>&#160;             {<span class="keywordflow">return</span> litermap_it1.second &lt; litermap_it2.second; }</div><div class="line"><a name="l01393"></a><span class="lineno"> 1393</span>&#160;             );</div><div class="line"><a name="l01394"></a><span class="lineno"> 1394</span>&#160;          lui_nsk = litermap_max-&gt;second;</div><div class="line"><a name="l01395"></a><span class="lineno"> 1395</span>&#160;          lrt_kcon =</div><div class="line"><a name="l01396"></a><span class="lineno"> 1396</span>&#160;            (T_METRIC) lui_nsk / (T_METRIC) lvectorchrom_matingPool.size();</div><div class="line"><a name="l01397"></a><span class="lineno"> 1397</span>&#160;</div><div class="line"><a name="l01398"></a><span class="lineno"> 1398</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01399"></a><span class="lineno"> 1399</span>&#160;          <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01400"></a><span class="lineno"> 1400</span>&#160;            std::cout &lt;&lt; geverbosepc_labelstep</div><div class="line"><a name="l01401"></a><span class="lineno"> 1401</span>&#160;                      &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l01402"></a><span class="lineno"> 1402</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;lui_nsk = &quot;</span>  &lt;&lt; lui_nsk</div><div class="line"><a name="l01403"></a><span class="lineno"> 1403</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;lrt_kcon = &quot;</span> &lt;&lt; lrt_kcon</div><div class="line"><a name="l01404"></a><span class="lineno"> 1404</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;Kmode = &quot;</span> &lt;&lt; litermap_max-&gt;first</div><div class="line"><a name="l01405"></a><span class="lineno"> 1405</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;\n&#39;</span>;</div><div class="line"><a name="l01406"></a><span class="lineno"> 1406</span>&#160;         </div><div class="line"><a name="l01407"></a><span class="lineno"> 1407</span>&#160;            <span class="keyword">auto</span>  litermap_it = lmap_chromSameNumclusterK.begin();</div><div class="line"><a name="l01408"></a><span class="lineno"> 1408</span>&#160;            std::cout &lt;&lt; <span class="stringliteral">&quot;&lt;CHROMOSEMESAMENUMCLUSTERK:&quot;</span></div><div class="line"><a name="l01409"></a><span class="lineno"> 1409</span>&#160;                      &lt;&lt; geverbosepc_labelstep  &lt;&lt; <span class="stringliteral">&quot;,length,&quot;</span> &lt;&lt; lmap_chromSameNumclusterK.size() &lt;&lt; <span class="charliteral">&#39;&gt;&#39;</span>;</div><div class="line"><a name="l01410"></a><span class="lineno"> 1410</span>&#160;            <span class="keywordflow">if</span> ( litermap_it != lmap_chromSameNumclusterK.end()) {</div><div class="line"><a name="l01411"></a><span class="lineno"> 1411</span>&#160;              std::cout &lt;&lt; litermap_it-&gt;first &lt;&lt; <span class="stringliteral">&quot;,&quot;</span> &lt;&lt; litermap_it-&gt;second;</div><div class="line"><a name="l01412"></a><span class="lineno"> 1412</span>&#160;              ++litermap_it;</div><div class="line"><a name="l01413"></a><span class="lineno"> 1413</span>&#160;            }</div><div class="line"><a name="l01414"></a><span class="lineno"> 1414</span>&#160;            <span class="keywordflow">for</span> (;litermap_it != lmap_chromSameNumclusterK.end(); ++litermap_it) {</div><div class="line"><a name="l01415"></a><span class="lineno"> 1415</span>&#160;              std::cout &lt;&lt; <span class="charliteral">&#39;;&#39;</span> &lt;&lt; litermap_it-&gt;first &lt;&lt; <span class="stringliteral">&quot;,&quot;</span> &lt;&lt; litermap_it-&gt;second;</div><div class="line"><a name="l01416"></a><span class="lineno"> 1416</span>&#160;            }</div><div class="line"><a name="l01417"></a><span class="lineno"> 1417</span>&#160;            std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l01418"></a><span class="lineno"> 1418</span>&#160;          }</div><div class="line"><a name="l01419"></a><span class="lineno"> 1419</span>&#160;          --geiinparam_verbose;</div><div class="line"><a name="l01420"></a><span class="lineno"> 1420</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01421"></a><span class="lineno"> 1421</span>&#160;              </div><div class="line"><a name="l01422"></a><span class="lineno"> 1422</span>&#160;        } <span class="comment">/*END CALCULATE n_sk*/</span></div><div class="line"><a name="l01423"></a><span class="lineno"> 1423</span>&#160;</div><div class="line"><a name="l01424"></a><span class="lineno"> 1424</span>&#160;      </div><div class="line"><a name="l01425"></a><span class="lineno"> 1425</span>&#160;        <span class="keywordflow">if</span> (lrt_kcon &lt;= 0.9) { <span class="comment">/*FIRST-STAGE MUTATION*/</span></div><div class="line"><a name="l01426"></a><span class="lineno"> 1426</span>&#160;</div><div class="line"><a name="l01427"></a><span class="lineno"> 1427</span>&#160;        </div><div class="line"><a name="l01428"></a><span class="lineno"> 1428</span>&#160;          T_METRIC lrt_pm = 0.1 * ( 1.0 - lrt_kcon );</div><div class="line"><a name="l01429"></a><span class="lineno"> 1429</span>&#160;        </div><div class="line"><a name="l01430"></a><span class="lineno"> 1430</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01431"></a><span class="lineno"> 1431</span>&#160;          geverbosepc_labelstep = <span class="stringliteral">&quot;(C). FIRST-STAGE MUTATION&quot;</span>;</div><div class="line"><a name="l01432"></a><span class="lineno"> 1432</span>&#160;          ++geiinparam_verbose;</div><div class="line"><a name="l01433"></a><span class="lineno"> 1433</span>&#160;          <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01434"></a><span class="lineno"> 1434</span>&#160;            std::cout &lt;&lt; geverbosepc_labelstep</div><div class="line"><a name="l01435"></a><span class="lineno"> 1435</span>&#160;                      &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l01436"></a><span class="lineno"> 1436</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;stringpoolcross_size = &quot;</span> &lt;&lt; lvectorchrom_matingPool.size()</div><div class="line"><a name="l01437"></a><span class="lineno"> 1437</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;population_size = &quot;</span> &lt;&lt; lvectorchrom_population.size()</div><div class="line"><a name="l01438"></a><span class="lineno"> 1438</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;lrt_pm = &quot;</span> &lt;&lt; lrt_pm</div><div class="line"><a name="l01439"></a><span class="lineno"> 1439</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;lrt_kcon = &quot;</span> &lt;&lt; lrt_kcon</div><div class="line"><a name="l01440"></a><span class="lineno"> 1440</span>&#160;                      &lt;&lt; std::endl;</div><div class="line"><a name="l01441"></a><span class="lineno"> 1441</span>&#160;          }</div><div class="line"><a name="l01442"></a><span class="lineno"> 1442</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01443"></a><span class="lineno"> 1443</span>&#160;</div><div class="line"><a name="l01444"></a><span class="lineno"> 1444</span>&#160;        </div><div class="line"><a name="l01445"></a><span class="lineno"> 1445</span>&#160;          <span class="keywordflow">for</span> (<span class="keyword">auto</span> lchrom_iter: lvectorchrom_matingPool) {</div><div class="line"><a name="l01446"></a><span class="lineno"> 1446</span>&#160;</div><div class="line"><a name="l01447"></a><span class="lineno"> 1447</span>&#160;            <span class="keywordflow">if</span> ( uniformdis_real01(<a class="code" href="clustering__operator__centroids_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>) &lt; lrt_pm ) {</div><div class="line"><a name="l01448"></a><span class="lineno"> 1448</span>&#160;            </div><div class="line"><a name="l01449"></a><span class="lineno"> 1449</span>&#160;              T_CLUSTERIDX lmmidx_krandNew = </div><div class="line"><a name="l01450"></a><span class="lineno"> 1450</span>&#160;                uniformdis_mmcidxMinMaxK(<a class="code" href="clustering__operator__centroids_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l01451"></a><span class="lineno"> 1451</span>&#160;            </div><div class="line"><a name="l01452"></a><span class="lineno"> 1452</span>&#160;<span class="preprocessor">#ifdef __INITIALIZATION_RANDOM_SAMPLING__</span></div><div class="line"><a name="l01453"></a><span class="lineno"> 1453</span>&#160;            </div><div class="line"><a name="l01454"></a><span class="lineno"> 1454</span>&#160;              <a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;</a> *lchrom_new =</div><div class="line"><a name="l01455"></a><span class="lineno"> 1455</span>&#160;                <span class="keyword">new</span> <a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;</a></div><div class="line"><a name="l01456"></a><span class="lineno"> 1456</span>&#160;                ( <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>(lmmidx_krandNew) * <a class="code" href="classdata_1_1_instance.html">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>());</div><div class="line"><a name="l01457"></a><span class="lineno"> 1457</span>&#160;</div><div class="line"><a name="l01458"></a><span class="lineno"> 1458</span>&#160;              <span class="comment">/*DECODE CHROMOSOME*/</span></div><div class="line"><a name="l01459"></a><span class="lineno"> 1459</span>&#160;              <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_FEATURE&gt;</a> </div><div class="line"><a name="l01460"></a><span class="lineno"> 1460</span>&#160;                lmatrixrowt_centroidsChromNew</div><div class="line"><a name="l01461"></a><span class="lineno"> 1461</span>&#160;                ( lchrom_new-&gt;<a class="code" href="classgaencode_1_1_chrom_variable_length.html#a4f49696aa5d8f038cb8df6ce81f40a93">getStringSize</a>() / <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>(),</div><div class="line"><a name="l01462"></a><span class="lineno"> 1462</span>&#160;                  <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>(),</div><div class="line"><a name="l01463"></a><span class="lineno"> 1463</span>&#160;                  lchrom_new-&gt;<a class="code" href="classgaencode_1_1_chrom_variable_length.html#ad2f7938aabc7bb8175344e36b372934d">getString</a>()</div><div class="line"><a name="l01464"></a><span class="lineno"> 1464</span>&#160;                  );</div><div class="line"><a name="l01465"></a><span class="lineno"> 1465</span>&#160;</div><div class="line"><a name="l01466"></a><span class="lineno"> 1466</span>&#160;              std::unordered_set&lt;uintidx&gt;&amp;&amp; lunorderedset_idxRandInstances =</div><div class="line"><a name="l01467"></a><span class="lineno"> 1467</span>&#160;                <a class="code" href="namespaceprob.html#a15090755bafc59aa295f2d02be64af8c">prob::getWithoutRepeatsSet</a></div><div class="line"><a name="l01468"></a><span class="lineno"> 1468</span>&#160;                ( lmatrixrowt_centroidsChromNew.getNumRows(),</div><div class="line"><a name="l01469"></a><span class="lineno"> 1469</span>&#160;                  [&amp;]() -&gt; <a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a></div><div class="line"><a name="l01470"></a><span class="lineno"> 1470</span>&#160;                  {</div><div class="line"><a name="l01471"></a><span class="lineno"> 1471</span>&#160;                    <span class="keywordflow">return</span> uniformdis_idxInstances(<a class="code" href="clustering__operator__centroids_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>);</div><div class="line"><a name="l01472"></a><span class="lineno"> 1472</span>&#160;                  }</div><div class="line"><a name="l01473"></a><span class="lineno"> 1473</span>&#160;                  );</div><div class="line"><a name="l01474"></a><span class="lineno"> 1474</span>&#160;            </div><div class="line"><a name="l01475"></a><span class="lineno"> 1475</span>&#160;              clusteringop::centroidsInitialized</div><div class="line"><a name="l01476"></a><span class="lineno"> 1476</span>&#160;                (lmatrixrowt_centroidsChromNew, </div><div class="line"><a name="l01477"></a><span class="lineno"> 1477</span>&#160;                 aivectorptinst_instances,</div><div class="line"><a name="l01478"></a><span class="lineno"> 1478</span>&#160;                 lunorderedset_idxRandInstances.begin()</div><div class="line"><a name="l01479"></a><span class="lineno"> 1479</span>&#160;                 );</div><div class="line"><a name="l01480"></a><span class="lineno"> 1480</span>&#160;</div><div class="line"><a name="l01481"></a><span class="lineno"> 1481</span>&#160;            </div><div class="line"><a name="l01482"></a><span class="lineno"> 1482</span>&#160;<span class="preprocessor">#else </span><span class="comment">/*PROPOSED BY THE AUTHOR*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01483"></a><span class="lineno"> 1483</span>&#160;</div><div class="line"><a name="l01484"></a><span class="lineno"> 1484</span>&#160;              <span class="keyword">auto</span> lmapitem_kSegments = lmap_kSegments.find(lmmidx_krandNew);</div><div class="line"><a name="l01485"></a><span class="lineno"> 1485</span>&#160;        </div><div class="line"><a name="l01486"></a><span class="lineno"> 1486</span>&#160;              <span class="keywordflow">if</span> ( !(lmapitem_kSegments != lmap_kSegments.end()) ) {</div><div class="line"><a name="l01487"></a><span class="lineno"> 1487</span>&#160;</div><div class="line"><a name="l01488"></a><span class="lineno"> 1488</span>&#160;                <a class="code" href="classpartition_1_1_partition_disj_sets.html">partition::PartitionDisjSets&lt;T_CLUSTERIDX&gt;</a></div><div class="line"><a name="l01489"></a><span class="lineno"> 1489</span>&#160;                  lpartitionDisjSets_clusters</div><div class="line"><a name="l01490"></a><span class="lineno"> 1490</span>&#160;                  (<a class="code" href="namespaceclusteringop.html#a8dbc301d107623488824391c69803015">clusteringop::pointerToDisjSets</a></div><div class="line"><a name="l01491"></a><span class="lineno"> 1491</span>&#160;                   (lvector_pairIdxLambda,</div><div class="line"><a name="l01492"></a><span class="lineno"> 1492</span>&#160;                    larrayiu_pi,</div><div class="line"><a name="l01493"></a><span class="lineno"> 1493</span>&#160;                    (<a class="code" href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a>) lmmidx_krandNew</div><div class="line"><a name="l01494"></a><span class="lineno"> 1494</span>&#160;                    )</div><div class="line"><a name="l01495"></a><span class="lineno"> 1495</span>&#160;                   );</div><div class="line"><a name="l01496"></a><span class="lineno"> 1496</span>&#160;           </div><div class="line"><a name="l01497"></a><span class="lineno"> 1497</span>&#160;                <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_FEATURE&gt;</a>  </div><div class="line"><a name="l01498"></a><span class="lineno"> 1498</span>&#160;                  lmatrixrowt_newMinMaxKSegments = </div><div class="line"><a name="l01499"></a><span class="lineno"> 1499</span>&#160;                  <a class="code" href="namespaceeac.html#acbb856419d6ad4b563a5dff8119787f6">tgca_getKSegments</a></div><div class="line"><a name="l01500"></a><span class="lineno"> 1500</span>&#160;                  (aiiterator_instfirst,</div><div class="line"><a name="l01501"></a><span class="lineno"> 1501</span>&#160;                   aiiterator_instlast,</div><div class="line"><a name="l01502"></a><span class="lineno"> 1502</span>&#160;                   lpartitionDisjSets_clusters,</div><div class="line"><a name="l01503"></a><span class="lineno"> 1503</span>&#160;                   [&amp;](<span class="keyword">const</span> <a class="code" href="classdata_1_1_instance.html">data::Instance&lt;T_FEATURE&gt;</a>* aiinst_iter)</div><div class="line"><a name="l01504"></a><span class="lineno"> 1504</span>&#160;                   {</div><div class="line"><a name="l01505"></a><span class="lineno"> 1505</span>&#160;                     <span class="keywordflow">return</span> aiinst_iter-&gt;<a class="code" href="classdata_1_1_instance.html#a922f0985a9b7d465b340831dcd540d83">getAttribute</a>(lui_idxAttMaxRange);</div><div class="line"><a name="l01506"></a><span class="lineno"> 1506</span>&#160;                   }</div><div class="line"><a name="l01507"></a><span class="lineno"> 1507</span>&#160;                   );</div><div class="line"><a name="l01508"></a><span class="lineno"> 1508</span>&#160;          </div><div class="line"><a name="l01509"></a><span class="lineno"> 1509</span>&#160;                lmap_kSegments.emplace(lmmidx_krandNew,lmatrixrowt_newMinMaxKSegments);</div><div class="line"><a name="l01510"></a><span class="lineno"> 1510</span>&#160;</div><div class="line"><a name="l01511"></a><span class="lineno"> 1511</span>&#160;                lmapitem_kSegments = lmap_kSegments.find(lmmidx_krandNew);</div><div class="line"><a name="l01512"></a><span class="lineno"> 1512</span>&#160;            </div><div class="line"><a name="l01513"></a><span class="lineno"> 1513</span>&#160;              } <span class="comment">//THERE IS NO SEGMENT Ki</span></div><div class="line"><a name="l01514"></a><span class="lineno"> 1514</span>&#160;</div><div class="line"><a name="l01515"></a><span class="lineno"> 1515</span>&#160; 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                );</div><div class="line"><a name="l01521"></a><span class="lineno"> 1521</span>&#160;             </div><div class="line"><a name="l01522"></a><span class="lineno"> 1522</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__INITIALIZATION RANDOM SAMPLING__*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01523"></a><span class="lineno"> 1523</span>&#160;</div><div class="line"><a name="l01524"></a><span class="lineno"> 1524</span>&#160;              lvectorchrom_population.push_back(lchrom_new);  </div><div class="line"><a name="l01525"></a><span class="lineno"> 1525</span>&#160;              <span class="keyword">delete</span> lchrom_iter;</div><div class="line"><a name="l01526"></a><span class="lineno"> 1526</span>&#160;          </div><div class="line"><a name="l01527"></a><span class="lineno"> 1527</span>&#160;            } <span class="keywordflow">else</span> {</div><div class="line"><a name="l01528"></a><span class="lineno"> 1528</span>&#160; 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          </div><div class="line"><a name="l01589"></a><span class="lineno"> 1589</span>&#160;              lchrom_iter-&gt;setObjetiveFunc(lT_VRC); </div><div class="line"><a name="l01590"></a><span class="lineno"> 1590</span>&#160;              lchrom_iter-&gt;setFitness(lT_VRC);  </div><div class="line"><a name="l01591"></a><span class="lineno"> 1591</span>&#160;            }</div><div class="line"><a name="l01592"></a><span class="lineno"> 1592</span>&#160;          }</div><div class="line"><a name="l01593"></a><span class="lineno"> 1593</span>&#160;          <span class="comment">/*The article does not establish if the fitness function should be </span></div><div class="line"><a name="l01594"></a><span class="lineno"> 1594</span>&#160;<span class="comment">            recalculated when the chromosomes crossed. crossing implies that </span></div><div class="line"><a name="l01595"></a><span class="lineno"> 1595</span>&#160;<span class="comment">            others are obtained at this time is not being recalculated</span></div><div class="line"><a name="l01596"></a><span class="lineno"> 1596</span>&#160;<span class="comment">          */</span></div><div class="line"><a name="l01597"></a><span class="lineno"> 1597</span>&#160;          T_METRIC lrt_sumfx = </div><div class="line"><a name="l01598"></a><span class="lineno"> 1598</span>&#160;            std::accumulate</div><div class="line"><a name="l01599"></a><span class="lineno"> 1599</span>&#160;            (lvectorchrom_matingPool.begin(),</div><div class="line"><a name="l01600"></a><span class="lineno"> 1600</span>&#160;             lvectorchrom_matingPool.end(),</div><div class="line"><a name="l01601"></a><span class="lineno"> 1601</span>&#160;             T_METRIC(0.0),</div><div class="line"><a name="l01602"></a><span class="lineno"> 1602</span>&#160;             [&amp;](T_METRIC airt_sumPartial, <span class="keyword">const</span> <a class="code" href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength&lt;T_FEATURE,T_METRIC&gt;</a>* lchrom_iter)</div><div class="line"><a name="l01603"></a><span class="lineno"> 1603</span>&#160;             {  </div><div class="line"><a name="l01604"></a><span class="lineno"> 1604</span>&#160;               <span class="keywordflow">return</span> airt_sumPartial + lchrom_iter-&gt;getFitness();</div><div class="line"><a name="l01605"></a><span class="lineno"> 1605</span>&#160;             }</div><div class="line"><a name="l01606"></a><span class="lineno"> 1606</span>&#160;             );</div><div class="line"><a name="l01607"></a><span class="lineno"> 1607</span>&#160;        </div><div class="line"><a name="l01608"></a><span class="lineno"> 1608</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01609"></a><span class="lineno"> 1609</span>&#160;          geverbosepc_labelstep = <span class="stringliteral">&quot;(C). SECOND-STAGE MUTATION&quot;</span>;</div><div class="line"><a name="l01610"></a><span class="lineno"> 1610</span>&#160;          ++geiinparam_verbose;</div><div class="line"><a name="l01611"></a><span class="lineno"> 1611</span>&#160;          <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01612"></a><span class="lineno"> 1612</span>&#160;            std::cout &lt;&lt; geverbosepc_labelstep</div><div class="line"><a name="l01613"></a><span class="lineno"> 1613</span>&#160;                      &lt;&lt; <span class="stringliteral">&quot;:  IN(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l01614"></a><span class="lineno"> 1614</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;stringpoolcross_size = &quot;</span> &lt;&lt; lvectorchrom_matingPool.size()</div><div class="line"><a name="l01615"></a><span class="lineno"> 1615</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;population_size = &quot;</span> &lt;&lt; lvectorchrom_population.size()</div><div class="line"><a name="l01616"></a><span class="lineno"> 1616</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;lrt_kcon = &quot;</span> &lt;&lt; lrt_kcon</div><div class="line"><a name="l01617"></a><span class="lineno"> 1617</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;lrt_sumfx = &quot;</span> &lt;&lt; lrt_sumfx</div><div class="line"><a name="l01618"></a><span class="lineno"> 1618</span>&#160;                      &lt;&lt; std::endl;</div><div class="line"><a name="l01619"></a><span class="lineno"> 1619</span>&#160;          }</div><div class="line"><a name="l01620"></a><span class="lineno"> 1620</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01621"></a><span class="lineno"> 1621</span>&#160;</div><div class="line"><a name="l01622"></a><span class="lineno"> 1622</span>&#160;          <span class="keywordflow">for</span> (<span class="keyword">auto</span> lchrom_iter: lvectorchrom_matingPool) {</div><div class="line"><a name="l01623"></a><span class="lineno"> 1623</span>&#160;            T_METRIC lrt_pm = std::exp(-lchrom_iter-&gt;getFitness() / lrt_sumfx);</div><div class="line"><a name="l01624"></a><span class="lineno"> 1624</span>&#160;            <span class="keywordflow">if</span> ( uniformdis_real01(<a class="code" href="clustering__operator__centroids_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a>) &lt; lrt_pm ) {</div><div class="line"><a name="l01625"></a><span class="lineno"> 1625</span>&#160;              <a class="code" href="namespacegaclusteringop.html#aefe966c20e6bd3d44f0621349782cb91">gaclusteringop::biDirectionMutation</a></div><div class="line"><a name="l01626"></a><span class="lineno"> 1626</span>&#160;                (*lchrom_iter,</div><div class="line"><a name="l01627"></a><span class="lineno"> 1627</span>&#160;                 larray_minFeactures,</div><div class="line"><a name="l01628"></a><span class="lineno"> 1628</span>&#160;                 larray_maxFeactures</div><div class="line"><a name="l01629"></a><span class="lineno"> 1629</span>&#160;                 ); </div><div class="line"><a name="l01630"></a><span class="lineno"> 1630</span>&#160;            } <span class="comment">//END IF MUTATION</span></div><div class="line"><a name="l01631"></a><span class="lineno"> 1631</span>&#160;            lvectorchrom_population.push_back(lchrom_iter);</div><div class="line"><a name="l01632"></a><span class="lineno"> 1632</span>&#160;          }</div><div class="line"><a name="l01633"></a><span class="lineno"> 1633</span>&#160;          lvectorchrom_matingPool.clear();</div><div class="line"><a name="l01634"></a><span class="lineno"> 1634</span>&#160;        </div><div class="line"><a name="l01635"></a><span class="lineno"> 1635</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01636"></a><span class="lineno"> 1636</span>&#160;          <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01637"></a><span class="lineno"> 1637</span>&#160;            std::cout &lt;&lt; geverbosepc_labelstep</div><div class="line"><a name="l01638"></a><span class="lineno"> 1638</span>&#160;                      &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="charliteral">&#39;)&#39;</span></div><div class="line"><a name="l01639"></a><span class="lineno"> 1639</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;stringpoolcross_size = &quot;</span> &lt;&lt; lvectorchrom_matingPool.size()</div><div class="line"><a name="l01640"></a><span class="lineno"> 1640</span>&#160;                      &lt;&lt; <span class="charliteral">&#39;,&#39;</span> &lt;&lt; <span class="stringliteral">&quot;population_size = &quot;</span> &lt;&lt; lvectorchrom_population.size()</div><div class="line"><a name="l01641"></a><span class="lineno"> 1641</span>&#160;                      &lt;&lt; std::endl;</div><div class="line"><a name="l01642"></a><span class="lineno"> 1642</span>&#160;          }</div><div class="line"><a name="l01643"></a><span class="lineno"> 1643</span>&#160;          --geiinparam_verbose;</div><div class="line"><a name="l01644"></a><span class="lineno"> 1644</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01645"></a><span class="lineno"> 1645</span>&#160;        </div><div class="line"><a name="l01646"></a><span class="lineno"> 1646</span>&#160;        } <span class="comment">/*END ELSE*/</span></div><div class="line"><a name="l01647"></a><span class="lineno"> 1647</span>&#160;</div><div class="line"><a name="l01648"></a><span class="lineno"> 1648</span>&#160;</div><div class="line"><a name="l01649"></a><span class="lineno"> 1649</span>&#160;      } <span class="comment">/*END MUTATION */</span></div><div class="line"><a name="l01650"></a><span class="lineno"> 1650</span>&#160;</div><div class="line"><a name="l01651"></a><span class="lineno"> 1651</span>&#160;        </div><div class="line"><a name="l01652"></a><span class="lineno"> 1652</span>&#160;    } <span class="comment">/*END GENETIC OPERATIONS*/</span></div><div class="line"><a name="l01653"></a><span class="lineno"> 1653</span>&#160;   </div><div class="line"><a name="l01654"></a><span class="lineno"> 1654</span>&#160;   </div><div class="line"><a name="l01655"></a><span class="lineno"> 1655</span>&#160;    { <span class="comment">/*BEGIN TERMINATION CRITERION*/</span></div><div class="line"><a name="l01656"></a><span class="lineno"> 1656</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01657"></a><span class="lineno"> 1657</span>&#160;      </div><div class="line"><a name="l01658"></a><span class="lineno"> 1658</span>&#160;      <span class="comment">/*ID PROC</span></div><div class="line"><a name="l01659"></a><span class="lineno"> 1659</span>&#160;<span class="comment">       */</span></div><div class="line"><a name="l01660"></a><span class="lineno"> 1660</span>&#160;      ++geverboseui_idproc;</div><div class="line"><a name="l01661"></a><span class="lineno"> 1661</span>&#160;      </div><div class="line"><a name="l01662"></a><span class="lineno"> 1662</span>&#160;      <span class="keyword">const</span> <span class="keywordtype">char</span> *lpc_labelStep = <span class="stringliteral">&quot;TERMINATION CRITERION ATTAINED:&quot;</span>;</div><div class="line"><a name="l01663"></a><span class="lineno"> 1663</span>&#160;      ++geiinparam_verbose;</div><div class="line"><a name="l01664"></a><span class="lineno"> 1664</span>&#160;      <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01665"></a><span class="lineno"> 1665</span>&#160;        std::cout &lt;&lt; lpc_labelStep</div><div class="line"><a name="l01666"></a><span class="lineno"> 1666</span>&#160;                  &lt;&lt; <span class="stringliteral">&quot;generation &quot;</span> &lt;&lt; llfh_listFuntionHist.getDomainUpperBound()</div><div class="line"><a name="l01667"></a><span class="lineno"> 1667</span>&#160;                  &lt;&lt; std::endl;</div><div class="line"><a name="l01668"></a><span class="lineno"> 1668</span>&#160;      }</div><div class="line"><a name="l01669"></a><span class="lineno"> 1669</span>&#160;      --geiinparam_verbose;</div><div class="line"><a name="l01670"></a><span class="lineno"> 1670</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01671"></a><span class="lineno"> 1671</span>&#160;    </div><div class="line"><a name="l01672"></a><span class="lineno"> 1672</span>&#160;      <span class="keywordflow">if</span> ( !(llfh_listFuntionHist.getDomainUpperBound() </div><div class="line"><a name="l01673"></a><span class="lineno"> 1673</span>&#160;             &lt; aiinp_inParamTGCA.getNumMaxGenerations() ) </div><div class="line"><a name="l01674"></a><span class="lineno"> 1674</span>&#160;           )</div><div class="line"><a name="l01675"></a><span class="lineno"> 1675</span>&#160;        <span class="keywordflow">break</span>;</div><div class="line"><a name="l01676"></a><span class="lineno"> 1676</span>&#160;      llfh_listFuntionHist.increaseDomainUpperBound();</div><div class="line"><a name="l01677"></a><span class="lineno"> 1677</span>&#160;    } <span class="comment">/*END 3.1.5 TERMINATION CRITERION*/</span></div><div class="line"><a name="l01678"></a><span class="lineno"> 1678</span>&#160;    </div><div class="line"><a name="l01679"></a><span class="lineno"> 1679</span>&#160;  } <span class="comment">/*END EVOLUTION While*/</span> </div><div class="line"><a name="l01680"></a><span class="lineno"> 1680</span>&#160;</div><div class="line"><a name="l01681"></a><span class="lineno"> 1681</span>&#160;  <span class="keywordflow">for</span> (<span class="keyword">auto</span>  liter_chrom: lvectorchrom_population)</div><div class="line"><a name="l01682"></a><span class="lineno"> 1682</span>&#160;    <span class="keyword">delete</span> liter_chrom;</div><div class="line"><a name="l01683"></a><span class="lineno"> 1683</span>&#160;  </div><div class="line"><a name="l01684"></a><span class="lineno"> 1684</span>&#160;  <a class="code" href="namespaceruntime.html#a68ccfe53d4771dd4a8b3e8dd0b30c847">runtime::stop</a>(let_executionTime);</div><div class="line"><a name="l01685"></a><span class="lineno"> 1685</span>&#160;  aoop_outParamGAC.setNumClusterK</div><div class="line"><a name="l01686"></a><span class="lineno"> 1686</span>&#160;    (T_CLUSTERIDX(lochrom_best.<a class="code" href="classgaencode_1_1_chrom_variable_length.html#a4f49696aa5d8f038cb8df6ce81f40a93">getStringSize</a>() / <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>())</div><div class="line"><a name="l01687"></a><span class="lineno"> 1687</span>&#160;     );</div><div class="line"><a name="l01688"></a><span class="lineno"> 1688</span>&#160;  aoop_outParamGAC.setMetricFuncRun</div><div class="line"><a name="l01689"></a><span class="lineno"> 1689</span>&#160;    (lochrom_best.<a class="code" href="classgaencode_1_1_chromosome_base.html#afc3f7dbd72d88157ba37eb8bea29478e">getObjetiveFunc</a>());</div><div class="line"><a name="l01690"></a><span class="lineno"> 1690</span>&#160;  aoop_outParamGAC.setFitness</div><div class="line"><a name="l01691"></a><span class="lineno"> 1691</span>&#160;    (lochrom_best.<a class="code" href="classgaencode_1_1_chromosome_base.html#a6e201d174946aea43c98dcde4a0088f8">getFitness</a>());</div><div class="line"><a name="l01692"></a><span class="lineno"> 1692</span>&#160;  aoop_outParamGAC.setAlgorithmRunTime</div><div class="line"><a name="l01693"></a><span class="lineno"> 1693</span>&#160;    (<a class="code" href="namespaceruntime.html#a01b41d36b7cbf6cd676242aa26fad9bd">runtime::getTime</a>(let_executionTime));</div><div class="line"><a name="l01694"></a><span class="lineno"> 1694</span>&#160;  aoop_outParamGAC.setNumTotalGenerations</div><div class="line"><a name="l01695"></a><span class="lineno"> 1695</span>&#160;    (llfh_listFuntionHist.getDomainUpperBound());</div><div class="line"><a name="l01696"></a><span class="lineno"> 1696</span>&#160;</div><div class="line"><a name="l01697"></a><span class="lineno"> 1697</span>&#160;  <span class="comment">/*FREE: COMPUTING STATISTICAL AND METRIC OF THE ALGORITHM</span></div><div class="line"><a name="l01698"></a><span class="lineno"> 1698</span>&#160;<span class="comment">   */</span> </div><div class="line"><a name="l01699"></a><span class="lineno"> 1699</span>&#160;<span class="preprocessor">#ifndef __WITHOUT_PLOT_STAT</span></div><div class="line"><a name="l01700"></a><span class="lineno"> 1700</span>&#160;</div><div class="line"><a name="l01701"></a><span class="lineno"> 1701</span>&#160;  <span class="keywordflow">if</span> ( aiinp_inParamTGCA.getWithPlotStatObjetiveFunc() ) {  </div><div class="line"><a name="l01702"></a><span class="lineno"> 1702</span>&#160;    <a class="code" href="namespaceruntime.html#a76d368836cce67aa62f4e939a9065b65">plot_funtionHist</a></div><div class="line"><a name="l01703"></a><span class="lineno"> 1703</span>&#160;      (llfh_listFuntionHist,</div><div class="line"><a name="l01704"></a><span class="lineno"> 1704</span>&#160;       aiinp_inParamTGCA,</div><div class="line"><a name="l01705"></a><span class="lineno"> 1705</span>&#160;       aoop_outParamGAC</div><div class="line"><a name="l01706"></a><span class="lineno"> 1706</span>&#160;       );  </div><div class="line"><a name="l01707"></a><span class="lineno"> 1707</span>&#160;  }</div><div class="line"><a name="l01708"></a><span class="lineno"> 1708</span>&#160;</div><div class="line"><a name="l01709"></a><span class="lineno"> 1709</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__WITHOUT_PLOT_STAT*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01710"></a><span class="lineno"> 1710</span>&#160;</div><div class="line"><a name="l01711"></a><span class="lineno"> 1711</span>&#160;<span class="preprocessor">#ifdef __VERBOSE_YES</span></div><div class="line"><a name="l01712"></a><span class="lineno"> 1712</span>&#160;</div><div class="line"><a name="l01713"></a><span class="lineno"> 1713</span>&#160;  <span class="keywordflow">if</span> ( geiinparam_verbose &lt;= geiinparam_verboseMax ) {</div><div class="line"><a name="l01714"></a><span class="lineno"> 1714</span>&#160;    geverbosepc_labelstep = lpc_labelAlgGA;</div><div class="line"><a name="l01715"></a><span class="lineno"> 1715</span>&#160;    std::cout &lt;&lt; lpc_labelAlgGA </div><div class="line"><a name="l01716"></a><span class="lineno"> 1716</span>&#160;              &lt;&lt; <span class="stringliteral">&quot;: OUT(&quot;</span> &lt;&lt; geiinparam_verbose &lt;&lt; <span class="stringliteral">&quot;)\n&quot;</span>;</div><div class="line"><a name="l01717"></a><span class="lineno"> 1717</span>&#160;    lochrom_best.<a class="code" href="classgaencode_1_1_chrom_variable_length.html#ad9aade851fa130ddc0fb16a1dd9a15e1">print</a>();</div><div class="line"><a name="l01718"></a><span class="lineno"> 1718</span>&#160;    std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l01719"></a><span class="lineno"> 1719</span>&#160; </div><div class="line"><a name="l01720"></a><span class="lineno"> 1720</span>&#160;    <span class="comment">/*DECODE CHROMOSOME*/</span></div><div class="line"><a name="l01721"></a><span class="lineno"> 1721</span>&#160;    <a class="code" href="classmat_1_1_matrix_row.html">mat::MatrixRow&lt;T_FEATURE&gt;</a> </div><div class="line"><a name="l01722"></a><span class="lineno"> 1722</span>&#160;      lmatrixrow_centroidsChromBest </div><div class="line"><a name="l01723"></a><span class="lineno"> 1723</span>&#160;      ( lochrom_best.<a class="code" href="classgaencode_1_1_chrom_variable_length.html#a4f49696aa5d8f038cb8df6ce81f40a93">getStringSize</a>() / <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>(),</div><div class="line"><a name="l01724"></a><span class="lineno"> 1724</span>&#160;        <a class="code" href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance&lt;T_FEATURE&gt;::getNumDimensions</a>(),</div><div class="line"><a name="l01725"></a><span class="lineno"> 1725</span>&#160;        lochrom_best.<a class="code" href="classgaencode_1_1_chrom_variable_length.html#ad2f7938aabc7bb8175344e36b372934d">getString</a>()</div><div class="line"><a name="l01726"></a><span class="lineno"> 1726</span>&#160;        );</div><div class="line"><a name="l01727"></a><span class="lineno"> 1727</span>&#160;</div><div class="line"><a name="l01728"></a><span class="lineno"> 1728</span>&#160;    std::ostringstream lostrstream_labelCentroids;</div><div class="line"><a name="l01729"></a><span class="lineno"> 1729</span>&#160;    lostrstream_labelCentroids &lt;&lt; <span class="stringliteral">&quot;&lt;CENTROIDSCLUSTER: &quot;</span> &lt;&lt; lpc_labelAlgGA</div><div class="line"><a name="l01730"></a><span class="lineno"> 1730</span>&#160;                               &lt;&lt; <span class="stringliteral">&quot;: generation &quot;</span> &lt;&lt;  llfh_listFuntionHist.getDomainUpperBound()</div><div class="line"><a name="l01731"></a><span class="lineno"> 1731</span>&#160;                               &lt;&lt; <span class="stringliteral">&quot;: lmatrixrow_centroidsChromBest[&quot;</span></div><div class="line"><a name="l01732"></a><span class="lineno"> 1732</span>&#160;                               &lt;&lt; &amp;lmatrixrow_centroidsChromBest &lt;&lt; <span class="charliteral">&#39;]&#39;</span>;</div><div class="line"><a name="l01733"></a><span class="lineno"> 1733</span>&#160;    lmatrixrow_centroidsChromBest.<a class="code" href="classmat_1_1_matrix_row.html#a156313f6aa515994b76321ff03780b16">print</a>(std::cout,lostrstream_labelCentroids.str().c_str(),<span class="charliteral">&#39;,&#39;</span>,<span class="charliteral">&#39;;&#39;</span>);</div><div class="line"><a name="l01734"></a><span class="lineno"> 1734</span>&#160;    std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l01735"></a><span class="lineno"> 1735</span>&#160;</div><div class="line"><a name="l01736"></a><span class="lineno"> 1736</span>&#160;    <span class="keyword">auto</span> lpartitionCentroids_clustersChromBest = </div><div class="line"><a name="l01737"></a><span class="lineno"> 1737</span>&#160;      <a class="code" href="namespacepartition.html#af77798d844adb5cb60e822da1de213e6">partition::makePartition</a></div><div class="line"><a name="l01738"></a><span class="lineno"> 1738</span>&#160;      (lmatrixrow_centroidsChromBest,</div><div class="line"><a name="l01739"></a><span class="lineno"> 1739</span>&#160;       aiiterator_instfirst,</div><div class="line"><a name="l01740"></a><span class="lineno"> 1740</span>&#160;       aiiterator_instlast,</div><div class="line"><a name="l01741"></a><span class="lineno"> 1741</span>&#160;       T_CLUSTERIDX(lmatrixrow_centroidsChromBest.getNumRows()),</div><div class="line"><a name="l01742"></a><span class="lineno"> 1742</span>&#160;       aifunc2p_dist</div><div class="line"><a name="l01743"></a><span class="lineno"> 1743</span>&#160;       );</div><div class="line"><a name="l01744"></a><span class="lineno"> 1744</span>&#160;    </div><div class="line"><a name="l01745"></a><span class="lineno"> 1745</span>&#160;    std::ostringstream lostrstream_labelShipBest;</div><div class="line"><a name="l01746"></a><span class="lineno"> 1746</span>&#160;    lostrstream_labelShipBest</div><div class="line"><a name="l01747"></a><span class="lineno"> 1747</span>&#160;      &lt;&lt; <span class="stringliteral">&quot;&lt;MEMBERCLUSTER:&quot;</span> &lt;&lt; lpc_labelAlgGA</div><div class="line"><a name="l01748"></a><span class="lineno"> 1748</span>&#160;      &lt;&lt; <span class="stringliteral">&quot;generation &quot;</span>    &lt;&lt;  llfh_listFuntionHist.getDomainUpperBound()</div><div class="line"><a name="l01749"></a><span class="lineno"> 1749</span>&#160;      &lt;&lt; <span class="stringliteral">&quot;:lpartitionCentroids_clustersChromBest&lt;&gt;[&quot;</span></div><div class="line"><a name="l01750"></a><span class="lineno"> 1750</span>&#160;      &lt;&lt; &amp;lpartitionCentroids_clustersChromBest &lt;&lt; <span class="charliteral">&#39;]&#39;</span>;</div><div class="line"><a name="l01751"></a><span class="lineno"> 1751</span>&#160;    lpartitionCentroids_clustersChromBest.print</div><div class="line"><a name="l01752"></a><span class="lineno"> 1752</span>&#160;      (std::cout,lostrstream_labelShipBest.str().c_str(),<span class="charliteral">&#39;,&#39;</span>);</div><div class="line"><a name="l01753"></a><span class="lineno"> 1753</span>&#160;    std::cout &lt;&lt; std::endl;</div><div class="line"><a name="l01754"></a><span class="lineno"> 1754</span>&#160;    </div><div class="line"><a name="l01755"></a><span class="lineno"> 1755</span>&#160;  }</div><div class="line"><a name="l01756"></a><span class="lineno"> 1756</span>&#160;  --geiinparam_verbose;</div><div class="line"><a name="l01757"></a><span class="lineno"> 1757</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__VERBOSE_YES*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01758"></a><span class="lineno"> 1758</span>&#160;</div><div class="line"><a name="l01759"></a><span class="lineno"> 1759</span>&#160;<span class="preprocessor">#ifndef __INITIALIZATION_RANDOM_SAMPLING__</span></div><div class="line"><a name="l01760"></a><span class="lineno"> 1760</span>&#160;  <span class="keywordflow">if</span> ( larrayiu_pi != NULL )</div><div class="line"><a name="l01761"></a><span class="lineno"> 1761</span>&#160;    <span class="keyword">delete</span> [] larrayiu_pi;</div><div class="line"><a name="l01762"></a><span class="lineno"> 1762</span>&#160;  <span class="keywordflow">if</span> ( larrayiu_pi != NULL )</div><div class="line"><a name="l01763"></a><span class="lineno"> 1763</span>&#160;    <span class="keyword">delete</span> [] larrayrt_lambda;</div><div class="line"><a name="l01764"></a><span class="lineno"> 1764</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__INITIALIZATION RANDOM SAMPLING__*/</span><span class="preprocessor"></span></div><div class="line"><a name="l01765"></a><span class="lineno"> 1765</span>&#160;  </div><div class="line"><a name="l01766"></a><span class="lineno"> 1766</span>&#160;  <span class="comment">/*DELETE VARIBLES EXTRAS OF THE ALGORITHM</span></div><div class="line"><a name="l01767"></a><span class="lineno"> 1767</span>&#160;<span class="comment">   */</span></div><div class="line"><a name="l01768"></a><span class="lineno"> 1768</span>&#160;  <span class="keyword">delete</span>[] larray_minFeactures;</div><div class="line"><a name="l01769"></a><span class="lineno"> 1769</span>&#160;  <span class="keyword">delete</span>[] larray_maxFeactures;</div><div class="line"><a name="l01770"></a><span class="lineno"> 1770</span>&#160;</div><div class="line"><a name="l01771"></a><span class="lineno"> 1771</span>&#160;  <span class="keywordflow">return</span> lochrom_best; </div><div class="line"><a name="l01772"></a><span class="lineno"> 1772</span>&#160; </div><div class="line"><a name="l01773"></a><span class="lineno"> 1773</span>&#160;} <span class="comment">/* END tgca_vkcentroid</span></div><div class="line"><a name="l01774"></a><span class="lineno"> 1774</span>&#160;<span class="comment">   */</span></div><div class="line"><a name="l01775"></a><span class="lineno"> 1775</span>&#160;</div><div class="line"><a name="l01776"></a><span class="lineno"> 1776</span>&#160;} <span class="comment">/*END eac */</span></div><div class="line"><a name="l01777"></a><span class="lineno"> 1777</span>&#160;</div><div class="line"><a name="l01778"></a><span class="lineno"> 1778</span>&#160;<span class="preprocessor">#endif </span><span class="comment">/*__TGCA_VKCENTROID_HPP__*/</span><span class="preprocessor"></span></div><div class="ttc" id="inparam__tgca_8hpp_html"><div class="ttname"><a href="inparam__tgca_8hpp.html">inparam_tgca.hpp</a></div><div class="ttdoc">Definition of TGCA program parameters.</div></div>
<div class="ttc" id="classpartition_1_1_partition_disj_sets_html"><div class="ttname"><a href="classpartition_1_1_partition_disj_sets.html">partition::PartitionDisjSets</a></div><div class="ttdoc">Partition of instances in base DisjSets data structure.</div><div class="ttdef"><b>Definition:</b> <a href="partition__disjsets_8hpp_source.html#l00037">partition_disjsets.hpp:37</a></div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_base_html_afc3f7dbd72d88157ba37eb8bea29478e"><div class="ttname"><a href="classgaencode_1_1_chromosome_base.html#afc3f7dbd72d88157ba37eb8bea29478e">gaencode::ChromosomeBase::getObjetiveFunc</a></div><div class="ttdeci">const T_METRIC getObjetiveFunc() const</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__base_8hpp_source.html#l00113">chromosome_base.hpp:113</a></div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_base_html_ab136d6f70ea068097d764e5bc34015e1"><div class="ttname"><a href="classgaencode_1_1_chromosome_base.html#ab136d6f70ea068097d764e5bc34015e1">gaencode::ChromosomeBase::setFitness</a></div><div class="ttdeci">void setFitness(T_METRIC ait_fitness)</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__base_8hpp_source.html#l00124">chromosome_base.hpp:124</a></div></div>
<div class="ttc" id="namespaceeac_html"><div class="ttname"><a href="namespaceeac.html">eac</a></div><div class="ttdoc">Evolutionary Algorithms for Clustering.</div></div>
<div class="ttc" id="namespaceclusteringop_html_aa3a86f02dae86d464cf4dfc2a7064922"><div class="ttname"><a href="namespaceclusteringop.html#aa3a86f02dae86d464cf4dfc2a7064922">clusteringop::slink</a></div><div class="ttdeci">void slink(uintidx *aoarrayiu_pi, T_REAL *aoarrayrt_lambda, const INPUT_ITERATOR aiiterator_instfirst, const INPUT_ITERATOR aiiterator_instlast, FUNCTION_DISTANCE function_distance)</div><div class="ttdef"><b>Definition:</b> <a href="clustering__operator__hierarchical_8hpp_source.html#l00205">clustering_operator_hierarchical.hpp:205</a></div></div>
<div class="ttc" id="clustering__operator__centroids_8hpp_html_acee5944d570f2fb7efdf1d4c801b30fb"><div class="ttname"><a href="clustering__operator__centroids_8hpp.html#acee5944d570f2fb7efdf1d4c801b30fb">gmt19937_eng</a></div><div class="ttdeci">StdMT19937 gmt19937_eng</div><div class="ttdef"><b>Definition:</b> <a href="random__ext_8hpp_source.html#l00063">random_ext.hpp:63</a></div></div>
<div class="ttc" id="namespaceruntime_html_a4b3214090bd4f8a54968b48ce58352ed"><div class="ttname"><a href="namespaceruntime.html#a4b3214090bd4f8a54968b48ce58352ed">runtime::functionhiststat_evaluateAll</a></div><div class="ttdeci">void functionhiststat_evaluateAll(RuntimeFunctionStat&lt; T_VALUE &gt; *aofhs_statObjectiveFunc[], std::vector&lt; T_VALUE &gt; &amp;aivectorT_data)</div><div class="ttdoc">Calculate statistical for metrics in run time.</div><div class="ttdef"><b>Definition:</b> <a href="runtime__statistic_8hpp_source.html#l00127">runtime_statistic.hpp:127</a></div></div>
<div class="ttc" id="namespacepartition_html_af77798d844adb5cb60e822da1de213e6"><div class="ttname"><a href="namespacepartition.html#af77798d844adb5cb60e822da1de213e6">partition::makePartition</a></div><div class="ttdeci">PartitionCentroids&lt; T_FEATURE, T_CLUSTERIDX, T_DIST, INPUT_ITERATOR &gt; makePartition(mat::MatrixRow&lt; T_FEATURE &gt; &amp;aimatrixt_centroids, const INPUT_ITERATOR aiiterator_instfirst, const INPUT_ITERATOR aiiterator_instlast, const T_CLUSTERIDX aicidx_numClusters, const dist::Dist&lt; T_DIST, T_FEATURE &gt; &amp;aifunc2p_dist)</div><div class="ttdef"><b>Definition:</b> <a href="partition__centroids_8hpp_source.html#l00259">partition_centroids.hpp:259</a></div></div>
<div class="ttc" id="namespacegaselect_html_ae9cfd02b23815a3c1291b4adb0b7658a"><div class="ttname"><a href="namespacegaselect.html#ae9cfd02b23815a3c1291b4adb0b7658a">gaselect::getIdxRouletteWheel</a></div><div class="ttdeci">T_INTIDX getIdxRouletteWheel(const std::vector&lt; T_PROBABILITY &gt; &amp;aivectorrt_probDist, const T_INTIDX aiuintidx_begin)</div><div class="ttdoc">Selection a random index in [IdxBegin,n].</div><div class="ttdef"><b>Definition:</b> <a href="ga__selection_8hpp_source.html#l00063">ga_selection.hpp:63</a></div></div>
<div class="ttc" id="common_8hpp_html_a3f6c33fb604556cdc425e7aa2289d009"><div class="ttname"><a href="common_8hpp.html#a3f6c33fb604556cdc425e7aa2289d009">uintidx</a></div><div class="ttdeci">uint32_t uintidx</div><div class="ttdef"><b>Definition:</b> <a href="common_8hpp_source.html#l00020">common.hpp:20</a></div></div>
<div class="ttc" id="namespaceeac_html_acbb856419d6ad4b563a5dff8119787f6"><div class="ttname"><a href="namespaceeac.html#acbb856419d6ad4b563a5dff8119787f6">eac::tgca_getKSegments</a></div><div class="ttdeci">auto tgca_getKSegments(const CONTAINER_ITERINST aiiterator_instfirst, const CONTAINER_ITERINST aiiterator_instlast, partition::PartitionDisjSets&lt; T_CLUSTERIDX &gt; &amp;aipartitionDisjSets_clusters, FUNCTION_GETATTRIBUTE function_getAttribute) -&gt; mat::MatrixRow&lt; decltype(function_getAttribute(*aiiterator_instfirst))&gt;</div><div class="ttdoc">tgca_getKSegments</div><div class="ttdef"><b>Definition:</b> <a href="tgca__vkcentroid_8hpp_source.html#l00072">tgca_vkcentroid.hpp:72</a></div></div>
<div class="ttc" id="classruntime_1_1_list_runtime_function_html"><div class="ttname"><a href="classruntime_1_1_list_runtime_function.html">runtime::ListRuntimeFunction</a></div><div class="ttdoc">ListRuntimeFunction store metrics in run time and count genetations.</div><div class="ttdef"><b>Definition:</b> <a href="list__runtime__function_8hpp_source.html#l00038">list_runtime_function.hpp:38</a></div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_base_html_a0c0f339b486fb7d097d2afac2539ddc8"><div class="ttname"><a href="classgaencode_1_1_chromosome_base.html#a0c0f339b486fb7d097d2afac2539ddc8">gaencode::ChromosomeBase::setObjetiveFunc</a></div><div class="ttdeci">void setObjetiveFunc(T_METRIC ait_objetiveFunc)</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__base_8hpp_source.html#l00108">chromosome_base.hpp:108</a></div></div>
<div class="ttc" id="classinout_1_1_out_param_g_a_c_html"><div class="ttname"><a href="classinout_1_1_out_param_g_a_c.html">inout::OutParamGAC</a></div><div class="ttdoc">Output Output parameters of the evolutionary algorithm.</div><div class="ttdef"><b>Definition:</b> <a href="outparam__gac_8hpp_source.html#l00035">outparam_gac.hpp:35</a></div></div>
<div class="ttc" id="clustering__operator__hierarchical_8hpp_html"><div class="ttname"><a href="clustering__operator__hierarchical_8hpp.html">clustering_operator_hierarchical.hpp</a></div><div class="ttdoc">Clustering operator hierarchical.</div></div>
<div class="ttc" id="namespaceclusteringop_html_a8dbc301d107623488824391c69803015"><div class="ttname"><a href="namespaceclusteringop.html#a8dbc301d107623488824391c69803015">clusteringop::pointerToDisjSets</a></div><div class="ttdeci">ds::DisjSets pointerToDisjSets(const std::vector&lt; std::pair&lt; uintidx, T_REAL &gt; &gt; &amp;aivector_pairIdxLambda, const uintidx *aiarrayiu_pi, const uintidx aiui_numClusterK)</div><div class="ttdef"><b>Definition:</b> <a href="clustering__operator__hierarchical_8hpp_source.html#l00099">clustering_operator_hierarchical.hpp:99</a></div></div>
<div class="ttc" id="namespaceinout_html_a58988b65e7b78cbd7c509518c7baff7e"><div class="ttname"><a href="namespaceinout.html#a58988b65e7b78cbd7c509518c7baff7e">inout::li_i</a></div><div class="ttdeci">uintidx li_i</div><div class="ttdef"><b>Definition:</b> <a href="inparamclustering__getparameter_8hpp_source.html#l00503">inparamclustering_getparameter.hpp:503</a></div></div>
<div class="ttc" id="classmat_1_1_matrix_row_html"><div class="ttname"><a href="classmat_1_1_matrix_row.html">mat::MatrixRow</a></div><div class="ttdoc">Matrix store items for row.</div><div class="ttdef"><b>Definition:</b> <a href="matrix_8hpp_source.html#l00046">matrix.hpp:46</a></div></div>
<div class="ttc" id="vector__utils_8hpp_html"><div class="ttname"><a href="vector__utils_8hpp.html">vector_utils.hpp</a></div><div class="ttdoc">Operations for vector manipulation.</div></div>
<div class="ttc" id="runtime__function_8hpp_html_a11402450dc3137a8e9b7ea1ee32403a1"><div class="ttname"><a href="runtime__function_8hpp.html#a11402450dc3137a8e9b7ea1ee32403a1">RUNTIMEFUNCTION_NOT_STORAGE</a></div><div class="ttdeci">#define RUNTIMEFUNCTION_NOT_STORAGE</div><div class="ttdef"><b>Definition:</b> <a href="runtime__function_8hpp_source.html#l00029">runtime_function.hpp:29</a></div></div>
<div class="ttc" id="namespacevectorutils_html_af3724cf77c2c17bafe3e0309331c5e9a"><div class="ttname"><a href="namespacevectorutils.html#af3724cf77c2c17bafe3e0309331c5e9a">vectorutils::partition</a></div><div class="ttdeci">std::vector&lt; INPUT_ITERATOR &gt; partition(INPUT_ITERATOR aiiterator_first, INPUT_ITERATOR aiiterator_last, const T_SIZE aist_numPartitions)</div><div class="ttdef"><b>Definition:</b> <a href="vector__utils_8hpp_source.html#l00042">vector_utils.hpp:42</a></div></div>
<div class="ttc" id="classdata_1_1_instance_html_a922f0985a9b7d465b340831dcd540d83"><div class="ttname"><a href="classdata_1_1_instance.html#a922f0985a9b7d465b340831dcd540d83">data::Instance::getAttribute</a></div><div class="ttdeci">const T_FEATURE getAttribute(uintidx aui_idxAttribute) const</div><div class="ttdef"><b>Definition:</b> <a href="instance_8hpp_source.html#l00201">instance.hpp:201</a></div></div>
<div class="ttc" id="classdata_1_1_instance_html_a90d1eaeb66cc1470bbfdb95434fdb761"><div class="ttname"><a href="classdata_1_1_instance.html#a90d1eaeb66cc1470bbfdb95434fdb761">data::Instance::getNumDimensions</a></div><div class="ttdeci">static uintidx getNumDimensions()</div><div class="ttdef"><b>Definition:</b> <a href="instance_8hpp_source.html#l00145">instance.hpp:145</a></div></div>
<div class="ttc" id="plot__runtime__function_8hpp_html"><div class="ttname"><a href="plot__runtime__function_8hpp.html">plot_runtime_function.hpp</a></div><div class="ttdoc">plot runtime function</div></div>
<div class="ttc" id="unsupervised__measures_8hpp_html_a2b678af6e0485eb4b6a1c56ba181d87d"><div class="ttname"><a href="unsupervised__measures_8hpp.html#a2b678af6e0485eb4b6a1c56ba181d87d">measuare_undefObjetiveFunc</a></div><div class="ttdeci">#define measuare_undefObjetiveFunc(T_METRIC)</div><div class="ttdef"><b>Definition:</b> <a href="unsupervised__measures_8hpp_source.html#l00052">unsupervised_measures.hpp:52</a></div></div>
<div class="ttc" id="classruntime_1_1_list_runtime_function_html_a2dd9ac78935607a1c992c1e396897486"><div class="ttname"><a href="classruntime_1_1_list_runtime_function.html#a2dd9ac78935607a1c992c1e396897486">runtime::ListRuntimeFunction::getHeaderFuntions</a></div><div class="ttdeci">std::string getHeaderFuntions()</div><div class="ttdef"><b>Definition:</b> <a href="list__runtime__function_8hpp_source.html#l00128">list_runtime_function.hpp:128</a></div></div>
<div class="ttc" id="namespaceruntime_html_a8dd0360926fc272cb3a627baf1132157"><div class="ttname"><a href="namespaceruntime.html#a8dd0360926fc272cb3a627baf1132157">runtime::ExecutionTime</a></div><div class="ttdeci">double ExecutionTime</div><div class="ttdef"><b>Definition:</b> <a href="execution__time_8hpp_source.html#l00030">execution_time.hpp:30</a></div></div>
<div class="ttc" id="namespaceinout_html_a0c10a45877a347dec0d4ec4e5b05b828"><div class="ttname"><a href="namespaceinout.html#a0c10a45877a347dec0d4ec4e5b05b828">inout::containerprint</a></div><div class="ttdeci">void containerprint(INPUT_ITERATOR iterator_first, INPUT_ITERATOR iterator_last, std::ostream &amp;os=std::cout, const char *aipc_label=&quot;&quot;, const char aic_delimCoef=',')</div><div class="ttdef"><b>Definition:</b> <a href="container__out_8hpp_source.html#l00050">container_out.hpp:50</a></div></div>
<div class="ttc" id="outparam__gac_8hpp_html"><div class="ttname"><a href="outparam__gac_8hpp.html">outparam_gac.hpp</a></div><div class="ttdoc">out parameters EA-clustering</div></div>
<div class="ttc" id="classgaencode_1_1_chrom_variable_length_html_ad2f7938aabc7bb8175344e36b372934d"><div class="ttname"><a href="classgaencode_1_1_chrom_variable_length.html#ad2f7938aabc7bb8175344e36b372934d">gaencode::ChromVariableLength::getString</a></div><div class="ttdeci">virtual T_GENE * getString()</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__variablelength_8hpp_source.html#l00230">chromosome_variablelength.hpp:230</a></div></div>
<div class="ttc" id="classpartition_1_1_partition_label_vector_html"><div class="ttname"><a href="classpartition_1_1_partition_label_vector.html">partition::PartitionLabelVector</a></div><div class="ttdoc">Partition of instances with label vector assigned previous.</div><div class="ttdef"><b>Definition:</b> <a href="partition__labelvector_8hpp_source.html#l00035">partition_labelvector.hpp:35</a></div></div>
<div class="ttc" id="namespacestats_html_a61fb958f0ffbfa6d41efd10f6e71f062"><div class="ttname"><a href="namespacestats.html#a61fb958f0ffbfa6d41efd10f6e71f062">stats::maxFeatures</a></div><div class="ttdeci">void maxFeatures(T_FEATURE *aoarrayt_maxFeactures, INPUT_ITERATOR aiiterator_instfirst, const INPUT_ITERATOR aiiterator_instlast)</div><div class="ttdoc">Obtain the maximum attributes of the instances.</div><div class="ttdef"><b>Definition:</b> <a href="stats__instances_8hpp_source.html#l00681">stats_instances.hpp:681</a></div></div>
<div class="ttc" id="classgaencode_1_1_chrom_variable_length_html_ad9aade851fa130ddc0fb16a1dd9a15e1"><div class="ttname"><a href="classgaencode_1_1_chrom_variable_length.html#ad9aade851fa130ddc0fb16a1dd9a15e1">gaencode::ChromVariableLength::print</a></div><div class="ttdeci">virtual void print(std::ostream &amp;os=std::cout, const char *aipc_label=&quot;&quot;, const char aic_delimCoef=',', const char aic_delimRow=';') const</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__variablelength_8hpp_source.html#l00263">chromosome_variablelength.hpp:263</a></div></div>
<div class="ttc" id="classgaencode_1_1_chromosome_base_html_a6e201d174946aea43c98dcde4a0088f8"><div class="ttname"><a href="classgaencode_1_1_chromosome_base.html#a6e201d174946aea43c98dcde4a0088f8">gaencode::ChromosomeBase::getFitness</a></div><div class="ttdeci">const T_METRIC getFitness() const</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__base_8hpp_source.html#l00119">chromosome_base.hpp:119</a></div></div>
<div class="ttc" id="common_8hpp_html_ab23a980e24a9b9cf5356bf87aaf02a4a"><div class="ttname"><a href="common_8hpp.html#ab23a980e24a9b9cf5356bf87aaf02a4a">COMMON_COUT_PRECISION</a></div><div class="ttdeci">#define COMMON_COUT_PRECISION</div><div class="ttdef"><b>Definition:</b> <a href="common_8hpp_source.html#l00031">common.hpp:31</a></div></div>
<div class="ttc" id="namespaceeac_html_a38d9061d38ffd831e162cbb6d4d0bbb4"><div class="ttname"><a href="namespaceeac.html#a38d9061d38ffd831e162cbb6d4d0bbb4">eac::tgca_vkcentroid</a></div><div class="ttdeci">gaencode::ChromVariableLength&lt; T_FEATURE, T_METRIC &gt; tgca_vkcentroid(inout::OutParamGAC&lt; T_METRIC, T_CLUSTERIDX &gt; &amp;aoop_outParamGAC, inout::InParamTGCA&lt; T_CLUSTERIDX, T_METRIC, T_FEATURE, T_FEATURE_SUM, T_INSTANCES_CLUSTER_K &gt; &amp;aiinp_inParamTGCA, const INPUT_ITERATOR aiiterator_instfirst, const INPUT_ITERATOR aiiterator_instlast, const dist::Dist&lt; T_METRIC, T_FEATURE &gt; &amp;aifunc2p_dist)</div><div class="ttdoc">TGCA .</div><div class="ttdef"><b>Definition:</b> <a href="tgca__vkcentroid_8hpp_source.html#l00176">tgca_vkcentroid.hpp:176</a></div></div>
<div class="ttc" id="namespaceum_html_a02c5655fb5595af79e18a1462114be29"><div class="ttname"><a href="namespaceum.html#a02c5655fb5595af79e18a1462114be29">um::VRC</a></div><div class="ttdeci">T_METRIC VRC(const mat::MatrixRow&lt; T_FEATURE &gt; &amp;aimatrixt_centroids, INPUT_ITERATOR aiiterator_instfirst, const INPUT_ITERATOR aiiterator_instlast, partition::Partition&lt; T_CLUSTERIDX &gt; &amp;aipartition_clusters, const dist::Dist&lt; T_METRIC, T_FEATURE &gt; &amp;aifunc2p_squaredDist)</div><div class="ttdef"><b>Definition:</b> <a href="unsupervised__measures_8hpp_source.html#l01431">unsupervised_measures.hpp:1431</a></div></div>
<div class="ttc" id="namespaceprob_html_a15090755bafc59aa295f2d02be64af8c"><div class="ttname"><a href="namespaceprob.html#a15090755bafc59aa295f2d02be64af8c">prob::getWithoutRepeatsSet</a></div><div class="ttdeci">auto getWithoutRepeatsSet(const uintidx aiuintidx_numbersToGenerate, FUNCTION function_generate) -&gt; std::unordered_set&lt; decltype(function_generate())&gt;</div><div class="ttdoc">Get a set of random number diferent.</div><div class="ttdef"><b>Definition:</b> <a href="probability__selection_8hpp_source.html#l00215">probability_selection.hpp:215</a></div></div>
<div class="ttc" id="classmat_1_1_matrix_row_html_a5391a205367fbaac82a26ddc377a80af"><div class="ttname"><a href="classmat_1_1_matrix_row.html#a5391a205367fbaac82a26ddc377a80af">mat::MatrixRow::getRow</a></div><div class="ttdeci">const T_FEATURE * getRow(const uintidx i) const</div><div class="ttdef"><b>Definition:</b> <a href="matrix_8hpp_source.html#l00181">matrix.hpp:181</a></div></div>
<div class="ttc" id="runtime__statistic_8hpp_html_a821c6beac41497051d4d05d51f4ae4d7"><div class="ttname"><a href="runtime__statistic_8hpp.html#a821c6beac41497051d4d05d51f4ae4d7">STATISTICAL_ALL_MEASURES</a></div><div class="ttdeci">#define STATISTICAL_ALL_MEASURES</div><div class="ttdef"><b>Definition:</b> <a href="runtime__statistic_8hpp_source.html#l00031">runtime_statistic.hpp:31</a></div></div>
<div class="ttc" id="nearestinstance__operator_8hpp_html_ac6dfec13abcffd9b8f8abd4ad0cf6f11"><div class="ttname"><a href="nearestinstance__operator_8hpp.html#ac6dfec13abcffd9b8f8abd4ad0cf6f11">NEARESTCENTROID_UNKNOWN</a></div><div class="ttdeci">#define NEARESTCENTROID_UNKNOWN</div><div class="ttdef"><b>Definition:</b> <a href="nearestinstance__operator_8hpp_source.html#l00035">nearestinstance_operator.hpp:35</a></div></div>
<div class="ttc" id="namespaceruntime_html_a01b41d36b7cbf6cd676242aa26fad9bd"><div class="ttname"><a href="namespaceruntime.html#a01b41d36b7cbf6cd676242aa26fad9bd">runtime::getTime</a></div><div class="ttdeci">ExecutionTime getTime(ExecutionTime &amp;aoexetime_time)</div><div class="ttdef"><b>Definition:</b> <a href="execution__time_8hpp_source.html#l00052">execution_time.hpp:52</a></div></div>
<div class="ttc" id="namespacestats_html_ad05deabf843908b6a0be813c39a346cd"><div class="ttname"><a href="namespacestats.html#ad05deabf843908b6a0be813c39a346cd">stats::minFeatures</a></div><div class="ttdeci">void minFeatures(T_FEATURE *aoarrayt_minFeactures, INPUT_ITERATOR aiiterator_instfirst, const INPUT_ITERATOR aiiterator_instlast)</div><div class="ttdoc">Obtain the minimum attributes of the instances.</div><div class="ttdef"><b>Definition:</b> <a href="stats__instances_8hpp_source.html#l00608">stats_instances.hpp:608</a></div></div>
<div class="ttc" id="classmat_1_1_matrix_row_html_a156313f6aa515994b76321ff03780b16"><div class="ttname"><a href="classmat_1_1_matrix_row.html#a156313f6aa515994b76321ff03780b16">mat::MatrixRow::print</a></div><div class="ttdeci">virtual void print(std::ostream &amp;os=std::cout, const char *aipc_label=&quot;&quot;, const char aic_delimCoef=',', const char aic_delimRow='\n') const</div><div class="ttdef"><b>Definition:</b> <a href="matrix_8hpp_source.html#l00336">matrix.hpp:336</a></div></div>
<div class="ttc" id="classmat_1_1_matrix_row_html_aa7c49917e475c1a9e57578fdd55e0f7a"><div class="ttname"><a href="classmat_1_1_matrix_row.html#aa7c49917e475c1a9e57578fdd55e0f7a">mat::MatrixRow::copyRow</a></div><div class="ttdeci">void copyRow(const uintidx aiuintidx_idxFrom, const uintidx aiuintidx_idxTo)</div><div class="ttdef"><b>Definition:</b> <a href="matrix_8hpp_source.html#l00205">matrix.hpp:205</a></div></div>
<div class="ttc" id="structdist_1_1_dist_html"><div class="ttname"><a href="structdist_1_1_dist.html">dist::Dist&lt; T_METRIC, T_FEATURE &gt;</a></div></div>
<div class="ttc" id="classruntime_1_1_runtime_function_stat_html"><div class="ttname"><a href="classruntime_1_1_runtime_function_stat.html">runtime::RuntimeFunctionStat</a></div><div class="ttdoc">Function statistical for metrics in run time.</div><div class="ttdef"><b>Definition:</b> <a href="runtime__statistic_8hpp_source.html#l00045">runtime_statistic.hpp:45</a></div></div>
<div class="ttc" id="namespaceruntime_html_a76d368836cce67aa62f4e939a9065b65"><div class="ttname"><a href="namespaceruntime.html#a76d368836cce67aa62f4e939a9065b65">runtime::plot_funtionHist</a></div><div class="ttdeci">void plot_funtionHist(runtime::ListRuntimeFunction&lt; COMMON_IDOMAIN &gt; &amp;ailfhT_listFuntionHist, const inout::InParamClustering &amp;aiipc_inParamClustering, inout::OutParamClustering&lt; T_METRIC, T_CLUSTERIDX &gt; &amp;aiopcT_outParamClustering)</div><div class="ttdef"><b>Definition:</b> <a href="plot__runtime__function_8hpp_source.html#l00048">plot_runtime_function.hpp:48</a></div></div>
<div class="ttc" id="classruntime_1_1_runtime_function_value_html"><div class="ttname"><a href="classruntime_1_1_runtime_function_value.html">runtime::RuntimeFunctionValue</a></div><div class="ttdoc">Function store metrics in run time.</div><div class="ttdef"><b>Definition:</b> <a href="runtime__function__value_8hpp_source.html#l00032">runtime_function_value.hpp:32</a></div></div>
<div class="ttc" id="namespaceruntime_html_a68ccfe53d4771dd4a8b3e8dd0b30c847"><div class="ttname"><a href="namespaceruntime.html#a68ccfe53d4771dd4a8b3e8dd0b30c847">runtime::stop</a></div><div class="ttdeci">void stop(ExecutionTime &amp;aoexetime_time)</div><div class="ttdef"><b>Definition:</b> <a href="execution__time_8hpp_source.html#l00042">execution_time.hpp:42</a></div></div>
<div class="ttc" id="classgaencode_1_1_chrom_variable_length_html_a4f49696aa5d8f038cb8df6ce81f40a93"><div class="ttname"><a href="classgaencode_1_1_chrom_variable_length.html#a4f49696aa5d8f038cb8df6ce81f40a93">gaencode::ChromVariableLength::getStringSize</a></div><div class="ttdeci">virtual const uintidx getStringSize() const</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__variablelength_8hpp_source.html#l00216">chromosome_variablelength.hpp:216</a></div></div>
<div class="ttc" id="namespaceprob_html_aa737d76e6416a765f004cd211eff712d"><div class="ttname"><a href="namespaceprob.html#aa737d76e6416a765f004cd211eff712d">prob::makeDistRouletteWheel</a></div><div class="ttdeci">auto makeDistRouletteWheel(INPUT_ITERATOR aiiterator_instfirst, INPUT_ITERATOR aiiterator_instlast, const FITNESSOPERATION fitness_func) -&gt; std::vector&lt; decltype(fitness_func(*aiiterator_instfirst))&gt;</div><div class="ttdef"><b>Definition:</b> <a href="probability__distribution_8hpp_source.html#l00071">probability_distribution.hpp:71</a></div></div>
<div class="ttc" id="namespaceclusteringop_html_ad5da564b9274992e7f64e53f3c9d14b3"><div class="ttname"><a href="namespaceclusteringop.html#ad5da564b9274992e7f64e53f3c9d14b3">clusteringop::reassignCluster</a></div><div class="ttdeci">uintidx reassignCluster(T_CLUSTERIDX *aioarraycidx_memberShip, const mat::MatrixRow&lt; T_FEATURE &gt; &amp;aimatrixt_centroids, INPUT_ITERATOR aiiterator_instfirst, const INPUT_ITERATOR aiiterator_instlast, const dist::Dist&lt; T_DIST, T_FEATURE &gt; &amp;aifunc2p_dist)</div><div class="ttdoc">Change each instance to the nearest cluster.</div><div class="ttdef"><b>Definition:</b> <a href="clustering__operator__centroids_8hpp_source.html#l00421">clustering_operator_centroids.hpp:421</a></div></div>
<div class="ttc" id="namespaceclusteringop_html_a7fadea9ded0a7c876b8f58c3f303d316"><div class="ttname"><a href="namespaceclusteringop.html#a7fadea9ded0a7c876b8f58c3f303d316">clusteringop::sortLambda</a></div><div class="ttdeci">std::vector&lt; std::pair&lt; uintidx, T_REAL &gt; &gt; sortLambda(const uintidx *aiarrayiu_pi, const T_REAL *aiarrayrt_lambda, const uintidx aiui_numObj)</div><div class="ttdef"><b>Definition:</b> <a href="clustering__operator__hierarchical_8hpp_source.html#l00038">clustering_operator_hierarchical.hpp:38</a></div></div>
<div class="ttc" id="unsupervised__measures_8hpp_html_aed2d7fec3655cf98554603a6b34bbd96"><div class="ttname"><a href="unsupervised__measures_8hpp.html#aed2d7fec3655cf98554603a6b34bbd96">measuare_undefVRC</a></div><div class="ttdeci">#define measuare_undefVRC(T_METRIC)</div><div class="ttdef"><b>Definition:</b> <a href="unsupervised__measures_8hpp_source.html#l00064">unsupervised_measures.hpp:64</a></div></div>
<div class="ttc" id="namespaceruntime_html_a088849fc5523fb2e072936513a13eb0e"><div class="ttname"><a href="namespaceruntime.html#a088849fc5523fb2e072936513a13eb0e">runtime::elapsedTime</a></div><div class="ttdeci">ExecutionTime elapsedTime(const ExecutionTime &amp;aoexetime_time)</div><div class="ttdef"><b>Definition:</b> <a href="execution__time_8hpp_source.html#l00047">execution_time.hpp:47</a></div></div>
<div class="ttc" id="namespacegaclusteringop_html_a182c10ea30b952abe8b98ae7e83f6938"><div class="ttname"><a href="namespacegaclusteringop.html#a182c10ea30b952abe8b98ae7e83f6938">gaclusteringop::newChromosome</a></div><div class="ttdeci">gaencode::ChromVariableLength&lt; T_FEATURE, T_REAL &gt; * newChromosome(mat::MatrixRow&lt; T_FEATURE &gt; &amp;aimatrixrowt_minMaxKSegments, T_REAL airt_fitnessInitial, T_REAL airt_objetiveInitial)</div><div class="ttdoc">Create new chromosome .</div><div class="ttdef"><b>Definition:</b> <a href="ga__clustering__operator_8hpp_source.html#l00069">ga_clustering_operator.hpp:69</a></div></div>
<div class="ttc" id="classgaencode_1_1_chrom_variable_length_html"><div class="ttname"><a href="classgaencode_1_1_chrom_variable_length.html">gaencode::ChromVariableLength</a></div><div class="ttdoc">Chromosome with variable length string.</div><div class="ttdef"><b>Definition:</b> <a href="chromosome__variablelength_8hpp_source.html#l00042">chromosome_variablelength.hpp:42</a></div></div>
<div class="ttc" id="common_8hpp_html_a734ee339b276e05610799bc83e7f4c94"><div class="ttname"><a href="common_8hpp.html#a734ee339b276e05610799bc83e7f4c94">COMMON_IDOMAIN</a></div><div class="ttdeci">#define COMMON_IDOMAIN</div><div class="ttdef"><b>Definition:</b> <a href="common_8hpp_source.html#l00027">common.hpp:27</a></div></div>
<div class="ttc" id="classdata_1_1_instance_html"><div class="ttname"><a href="classdata_1_1_instance.html">data::Instance</a></div><div class="ttdoc">Patterns, usually vectors in a multidimensional space.</div><div class="ttdef"><b>Definition:</b> <a href="instance_8hpp_source.html#l00037">instance.hpp:37</a></div></div>
<div class="ttc" id="namespacegagenericop_html_a7dd4f4513a4c1ee9e74f02938d860c4c"><div class="ttname"><a href="namespacegagenericop.html#a7dd4f4513a4c1ee9e74f02938d860c4c">gagenericop::onePointCrossover</a></div><div class="ttdeci">void onePointCrossover(gaencode::ChromFixedLength&lt; T_GENE, T_METRIC &gt; &amp;aochrom_child1, gaencode::ChromFixedLength&lt; T_GENE, T_METRIC &gt; &amp;aochrom_child2, const gaencode::ChromFixedLength&lt; T_GENE, T_METRIC &gt; &amp;aichrom_parent1, const gaencode::ChromFixedLength&lt; T_GENE, T_METRIC &gt; &amp;aichrom_parent2)</div><div class="ttdoc">single-point crossover (Michalewicz, 1992).</div><div class="ttdef"><b>Definition:</b> <a href="ga__generic__operator_8hpp_source.html#l00121">ga_generic_operator.hpp:121</a></div></div>
<div class="ttc" id="container__out_8hpp_html"><div class="ttname"><a href="container__out_8hpp.html">container_out.hpp</a></div><div class="ttdoc">container out</div></div>
<div class="ttc" id="inparam__variablek_8hpp_html_aeb7d10f56da8d5c8965362a37ae94d02"><div class="ttname"><a href="inparam__variablek_8hpp.html#aeb7d10f56da8d5c8965362a37ae94d02">INPARAMCLUSTERING_DEFAULT_CLUSTERK_UNDEFINED</a></div><div class="ttdeci">#define INPARAMCLUSTERING_DEFAULT_CLUSTERK_UNDEFINED</div><div class="ttdef"><b>Definition:</b> <a href="inparam__variablek_8hpp_source.html#l00027">inparam_variablek.hpp:27</a></div></div>
<div class="ttc" id="classinout_1_1_in_param_t_g_c_a_html"><div class="ttname"><a href="classinout_1_1_in_param_t_g_c_a.html">inout::InParamTGCA</a></div><div class="ttdoc">Input parameter for TGCA a two-stage genetic algorithm .</div><div class="ttdef"><b>Definition:</b> <a href="inparam__tgca_8hpp_source.html#l00040">inparam_tgca.hpp:40</a></div></div>
<div class="ttc" id="namespaceclusteringop_html_ac52fbdbee047ca93bef1426d6493f31f"><div class="ttname"><a href="namespaceclusteringop.html#ac52fbdbee047ca93bef1426d6493f31f">clusteringop::getCentroids</a></div><div class="ttdeci">T_CLUSTERIDX getCentroids(mat::MatrixRow&lt; T_FEATURE &gt; &amp;aomatrixt_centroids, mat::MatrixRow&lt; T_FEATURE_SUM &gt; &amp;aomatrixt_sumInstancesCluster, std::vector&lt; T_INSTANCES_CLUSTER_K &gt; &amp;aovectort_numInstancesInClusterK, partition::Partition&lt; T_CLUSTERIDX &gt; &amp;aipartition_clusters, INPUT_ITERATOR aiiterator_instfirst, const INPUT_ITERATOR aiiterator_instlast)</div><div class="ttdef"><b>Definition:</b> <a href="clustering__operator__centroids_8hpp_source.html#l00608">clustering_operator_centroids.hpp:608</a></div></div>
<div class="ttc" id="namespacegaclusteringop_html_aefe966c20e6bd3d44f0621349782cb91"><div class="ttname"><a href="namespacegaclusteringop.html#aefe966c20e6bd3d44f0621349782cb91">gaclusteringop::biDirectionMutation</a></div><div class="ttdeci">void biDirectionMutation(gaencode::ChromosomeString&lt; T_FEATURE, T_REAL &gt; &amp;aiochromstr_toMutate, const T_FEATURE *aiarrayt_minFeatures, const T_FEATURE *aiarrayt_maxFeatures)</div><div class="ttdef"><b>Definition:</b> <a href="ga__clustering__operator_8hpp_source.html#l01359">ga_clustering_operator.hpp:1359</a></div></div>
<div class="ttc" id="leac_8hpp_html"><div class="ttname"><a href="leac_8hpp.html">leac.hpp</a></div><div class="ttdoc">LEAC.</div></div>
<div class="ttc" id="classruntime_1_1_runtime_function_value_html_ac2b3712c5f0ce97aa2c58016cc9ad986"><div class="ttname"><a href="classruntime_1_1_runtime_function_value.html#ac2b3712c5f0ce97aa2c58016cc9ad986">runtime::RuntimeFunctionValue::setValue</a></div><div class="ttdeci">void setValue(T_VALUE aiT_value)</div><div class="ttdef"><b>Definition:</b> <a href="runtime__function__value_8hpp_source.html#l00046">runtime_function_value.hpp:46</a></div></div>
<div class="ttc" id="namespaceruntime_html_aa9ffc08cd526dab9f19a9a4000741a25"><div class="ttname"><a href="namespaceruntime.html#aa9ffc08cd526dab9f19a9a4000741a25">runtime::start</a></div><div class="ttdeci">ExecutionTime start()</div><div class="ttdef"><b>Definition:</b> <a href="execution__time_8hpp_source.html#l00037">execution_time.hpp:37</a></div></div>
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